Companilactobacillus farciminis: LF20184_00325
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Entry
LF20184_00325 CDS
T06098
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lfm
Companilactobacillus farciminis
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfm03032
]
LF20184_00325
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_00325
Enzymes [BR:
lfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LF20184_00325
DNA replication proteins [BR:
lfm03032
]
Prokaryotic type
DNA Topoisomerases
LF20184_00325
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LF20184_00325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ATO45298
LinkDB
All DBs
Position
67565..70057
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AA seq
830 aa
AA seq
DB search
MADHRIENVNLTEVMKNSFVDYAASVIVSRALPDVRDGLKPVHRRILYGMNELGVTPDKP
YKKSARFVGDIMGKYHPHGDSAIYESMVRMAQDFSYRYPLVDGHGNFGSIDGDPPAAMRY
TEARMSKMAVEMLRDINKDTVDLIPNYDGEEKEPTVLPARFPNLLVNGATGIAVGMTTNI
PSHNLKEVIDALHILMRNKDATVADLMKAIPGPDFPTGGIIMGRSGIRKAYEHGRGTIIL
RAKVDVVTKKSGAEQIIVTELPYMVNKAKLVERIADLAREKKIEGITDLNDESDREGMRI
VIDLRRDMSASVVLNNLYKLTQLQISYGINMVAIVGKTPKVFSLKGVLVEYLKHQEVVIR
RRTEYELRRAQARAHILEGLRIALDHIDEIIKIIRGSQTSAVAKQTLMDKFKLSDKQSQA
ILDMRLVRLTGLERDKVEAEYQDLLVKIADYKDILATPERVDKIIYDELLEIQEKFGDDR
RTEIRASEVANIEDEDLIEEENILVVLTHNGYIKRLSADEFRVQNRGGRGVQGMGVHDDD
FIEQMIYTSTHDRLLFFTNAGKVYRIKGYEVPEYGRTAKGIPVINLLNIEKGEKIQTVIN
VDKDVDPEKSFLFFVTKQGTVKRTPVTDFANIRHSGLRAITLKDEDELTNVFLTNGEKVI
VIGTHKGYAVTFKESDVRPMGRTAAGVRGIKLRDEDYVIGSSIAETGQEVLTISEKGYGK
RTSVEEYPVKGRGGKGIKTANVTEKNGPIAGLMVVNGDEDIMLITDKGVMIRFDVQSVSQ
TGRATLGVRLIKVDDDSIVSTMTKIAEDESESSDEDSTESTDETTENKED
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcatagaatagaaaatgttaacttgacagaagtcatgaagaattccttcgtt
gactacgctgctagtgttattgtgtcacgtgcgctaccagacgttcgtgatggcctcaaa
ccagttcatcgtcgtatcctttatggtatgaatgaattaggtgttacacctgataaacca
tacaagaagagtgctcgtttcgttggtgacattatgggtaagtatcacccccatggtgac
tccgctatttatgaatcaatggttagaatggcgcaggatttcagttaccgttatccatta
gttgatggacacggaaactttggttcaatcgatggtgatccacctgctgctatgcgttat
accgaagctagaatgagtaagatggcagtggaaatgttgcgtgatatcaacaaagatact
gttgaccttattcctaactacgatggtgaagaaaaagaaccgactgttttgccagctaga
ttccctaatcttttggttaacggagctaccggtatcgctgttggtatgacaactaatatt
ccatcacacaacttaaaagaagttatcgatgctttgcacattttgatgagaaacaaagat
gcaacagtcgctgacttgatgaaagcaattcccggaccagatttcccaactggtggtatc
atcatgggtcgttctggtatcagaaaagcttatgaacatggtcgtggaacaattatcttg
cgtgccaaagttgacgttgtaacgaagaagagtggcgctgaacaaatcatcgttactgaa
cttccatatatggtcaataaagctaagttggttgaaagaatcgctgatttagcacgtgaa
aagaagattgaaggaattactgatctaaacgatgaatccgatcgtgaaggtatgcgtatc
gttatcgaccttcgccgtgatatgagtgcttcagttgttttgaacaatctttataaattg
acgcaacttcaaatttcttatggtatcaacatggttgctatcgttggtaagacacctaaa
gtcttctcactaaaaggcgttttggttgaatacttgaagcaccaagaagttgttatcaga
agaagaactgaatatgaattaagacgtgctcaagctcgggctcacattcttgaaggattg
agaattgctttggatcacattgatgaaatcatcaagatcatccgtggctctcaaacctca
gctgtagctaagcaaactttgatggacaagttcaagttatctgacaaacaatcacaagct
atcctagatatgcgtttggttcgtttgacaggtttggaacgtgacaaagttgaagccgaa
taccaagatttgttagtaaaaattgctgactacaaagatattttggctacacctgaacgt
gttgataaaatcatctacgacgaattgcttgaaattcaagaaaaattcggggatgacaga
agaactgaaatccgtgctagtgaagttgccaacatcgaagatgaagatttgattgaagaa
gaaaacatcttggttgttttgacacacaatggctacatcaaacgtttgtcagcggatgaa
ttccgtgttcaaaatcgtggtggccgtggtgttcaaggaatgggtgtgcatgatgatgat
ttcattgaacaaatgatttacacatcaactcatgaccgtctcttgttcttcactaatgct
ggtaaggtttaccgtatcaaaggttacgaagttcctgaatatggacggacagccaaaggt
attccagttatcaacttgttgaatatcgaaaaaggcgagaagattcaaaccgtcatcaat
gtcgataaagatgttgatccagagaagtccttcttgttcttcgttactaagcaaggaact
gttaaacgtacaccagtaactgatttcgctaatattagacattctggtcttcgtgccatt
actctaaaggacgaggatgagttaactaatgtcttcttaactaatggtgaaaaagttatc
gttattggtactcacaagggttatgccgtgacattcaaggaaagcgatgttcgtccaatg
ggaagaactgctgctggtgttcgtggtattaaactgcgtgacgaagattacgttattggt
tcatcgattgctgaaactggtcaagaagtgctaactatttccgaaaaaggttatggtaag
agaacttcagttgaagaatatccagttaaaggtcgtggtggtaaaggtatcaagaccgcc
aacgttaccgaaaagaatggtccaattgctggattgatggtcgtcaatggtgatgaagat
atcatgttgatcacggataaaggtgttatgattcgttttgatgttcaaagcgtttcacaa
actggacgtgcaactttaggtgtcagattgattaaagttgacgatgattcaatcgtttca
acaatgactaagattgctgaagatgagtcagaatcaagcgatgaagattcaactgaatca
acagatgaaactactgaaaacaaagaagattaa
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