Companilactobacillus farciminis: LF20184_01430
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Entry
LF20184_01430 CDS
T06098
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm03030
DNA replication
lfm03430
Mismatch repair
lfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LF20184_01430
03430 Mismatch repair
LF20184_01430
03440 Homologous recombination
LF20184_01430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfm03032
]
LF20184_01430
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_01430
Enzymes [BR:
lfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LF20184_01430
DNA replication proteins [BR:
lfm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LF20184_01430
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LF20184_01430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
RNase_H_2
DNApol_Exo
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ATO45500
LinkDB
All DBs
Position
301120..302109
Genome browser
AA seq
329 aa
AA seq
DB search
MKIIVGSYFLDIDKGKKKKIEREKGKSRLFFPKDYTLLDFETTGYDPRWDRIIDIGALKV
KDNNVVDKIDNLVKYEDDNTVPAMVEGMTGITSEMIEKDGVTAEIAMRNLVDFIDNDVIV
GFNVNFDINFLYDFANKYFGQKVKNDFVDVLRIARKFYPEERHNRLADCIKRIEPKKEQS
HRGLDDCYDTKLIFDFFEENIDLNLLNEKRHYHHNKIDLKQLKPESVMIDEDNPFYGCNV
CFTGKLDGLLRKQAAQLVVNLGGIAQNGITLKTDYLILGDTAYSLHNKGTMTTKMKKAYD
LIGKGSNLKVINESVFLDMLNDRQNEIEG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattattgttggttcatactttttagatatagataaaggtaaaaagaaaaaaata
gaaagagaaaagggaaaaagtagattattttttccaaaggattataccttgctggatttt
gaaacgacgggatatgatcctagatgggatcgtattattgatattggagcgttaaaagta
aaggataataatgttgtagataaaattgataatcttgttaagtatgaagatgataatacc
gttcctgcgatggtggaaggcatgacgggaattaccagtgaaatgattgaaaaagatggc
gttaccgcagaaatagcaatgagaaacttagtagattttatagacaatgatgtgatcgtt
ggatttaatgtcaattttgatattaattttctttatgattttgcaaataagtattttggc
cagaaggtaaaaaatgattttgttgatgtgctaagaattgctagaaaattttacccagaa
gaacgtcataatagattggctgattgtataaaacgaatagaacccaaaaaagagcagtct
cacagaggactagatgattgttatgatacgaaattaatatttgacttttttgaggaaaat
attgatttaaatctattaaatgaaaaaagacattatcatcataataaaattgatttgaaa
caattaaaaccggaaagtgtaatgattgatgaagataatccattttatggatgtaatgtg
tgttttacaggtaaattagatggtttgttaagaaagcaagcggcacaattagttgttaat
ttaggtggaatagcccaaaacgggataacattaaaaacggactatttaatattaggtgat
acagcatatagtttacacaataaaggtactatgactacgaaaatgaaaaaagcatatgat
ttaattggaaaaggaagtaatttaaaagtaataaatgaatcagtttttctggatatgtta
aacgataggcaaaatgaaattgaggggtaa
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