Companilactobacillus farciminis: LF20184_01455
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Entry
LF20184_01455 CDS
T06098
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lfm
Companilactobacillus farciminis
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_01455
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LF20184_01455
Archaeal homologous recombinant proteins
LF20184_01455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
Motif
Other DBs
NCBI-ProteinID:
ATO45505
LinkDB
All DBs
Position
complement(308207..311374)
Genome browser
AA seq
1055 aa
AA seq
DB search
MKPIYLDINFFGPHEHSIIDFRKLDESPIFLIGGDTGAGKSTIFDAMTFALFGSTTSERE
AKEMRSQFAEGTDTTKVVFYFEQNGKIFKVERTPEQFLARKRGTGFTKKAPTANLSIVDE
VNGVEVESIATKPVDVGNAISEILNLTADQFKKIILLPQNDFSEFLKSNTADKEKILKKI
FGTQLFTDFTVKLKDHYDQATSKAQDFETKIQNQLSSPIWNDEEKTQLKEIDNDQLNDTL
GKFVANRQATLNEAKKTEQAKFAAKKKTEATYQVALDISKKFDQLNEYQTQYQSHITNQA
DNISQKQIHISELQWAQPLQETVRDLERLEKDQTDTLNSKKDLEQKLQLAHKNLAAAQAK
TTELTSQQANFDEKNQQAQKLTVLIAKVQEIEAIKKSLSQLQPRLEQITKTVQTKSQELT
TINDSIQAKNEELSKYQDFPSQKDKLVQERADFIDQFSPLETDRQNAADAVAKTQKKLKQ
LHADLDQKTKVFENAKKDYQEKIKTRQSLMIAQLRQELVEGEACAVCGSTEHPYAKEAAV
ANEKELRKSMDAVDNSQKIFAAKETDLKNIQQTIQEVSDEFDQQQQKAVSTQIALSTHYT
QVVANTSIELPQQFDLVAIKDTFKKSIDQLNEQIQISQKLAQEIKDLENNLNRQQQSLSQ
DKSELDKLTAQIQTRENDLQTKSADLSDSTTTSQQLITKKNELVSAYEKFQKDLKVAQDA
AHKNEINYSNNQTKLTDTQTQLDKLTTSLRNLSDKLHQALNADNAKTNDRNLLDRWILEI
SQNQLSKLQNDVTSYQKEKEILTDNISKVTAQLKDQTKPDIVALKQAKVEAEQTHLIAAK
QTNSFSHDLKEATQNFEQVQKILQAQGNFTKELAAITSLYNIVTGKDGNENKLKLETYVV
QNYLLKILNYANRKFLSILSNDRYYFQLSTESTNKQRDHGLDINIYDRQTNATRSSDTLS
GGETFIAALSIALSLSEVVQSSANGVQIDALFIDEGFGSLDEETLNEAMKALTEIGQNRM
VGVISHIESMKQSIGQQLLVQKVGNGKSTIKIITK
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatatatttagatatcaacttctttggaccacatgaacattcaattattgat
tttagaaaactcgatgaatcacctatctttctaattggtggtgataccggagctggtaag
tctactatctttgatgccatgacctttgccctctttggtagtacaactagtgaacgtgaa
gctaaagaaatgcgtagtcaattcgctgaaggcaccgatacgaccaaagtagttttctac
ttcgaacaaaatggcaaaatttttaaagtcgaacgaacacctgaacaattcctagctaga
aaaagaggtaccggttttactaaaaaagcacctactgcaaatctgtcaatcgttgacgaa
gttaatggtgttgaggtagaaagtatcgcgactaaaccagttgacgtcggtaatgctatc
tccgagattcttaatttaaccgccgatcaatttaagaaaatcattcttttaccacaaaat
gatttttcagagtttttgaaatcaaatactgctgataaagaaaaaatcctcaaaaagatt
ttcggaactcaattattcactgacttcacagttaagctaaaagatcactatgaccaggcc
acttctaaggctcaagattttgaaaccaaaattcaaaatcaactatcctctcccatttgg
aacgacgaagaaaaaactcaattaaaagagatcgacaatgatcaattgaacgacactttg
ggaaaatttgttgccaaccgtcaggctactttaaatgaagcaaaaaagactgaacaagcc
aaatttgctgccaagaaaaagaccgaagctacctatcaagtagctttagatatcagcaaa
aaatttgaccagttgaatgaatatcaaacacaatatcaaagtcacattaccaatcaagcc
gacaatatcagtcaaaagcaaattcacatttctgaattgcaatgggcacaacctcttcag
gaaacagttcgtgatttagagcgcctggagaaagatcaaactgatactttaaacagcaaa
aaagatctcgaacaaaagctacaactcgcccataagaatttggccgctgcccaagctaaa
actacggaattaactagtcaacaggcaaattttgacgaaaagaaccagcaagctcaaaaa
ctgactgttctaattgccaaagttcaagaaattgaagccattaaaaagtcactatcccaa
ttacaaccgcgcttagagcaaattactaagactgtccaaacaaaatctcaagaattaact
accattaacgattcaattcaagctaagaacgaagaactgtctaaataccaggacttccct
agtcaaaaagataaattagttcaggaaagagccgatttcatcgaccaattctcacctctt
gaaactgatcgtcaaaatgctgccgacgccgtagccaaaacacaaaagaagctcaaacaa
ttgcacgctgacttggatcaaaagactaaggtatttgagaatgctaaaaaagattatcaa
gaaaagataaaaactagacaatcactaatgattgcccagcttcgtcaagaactagtcgaa
ggagaagcctgcgctgtctgtggttcaactgaacatccctatgccaaagaagccgccgtc
gcaaatgaaaaagaactccgcaaatcaatggatgctgtcgataattctcaaaaaatcttt
gctgctaaagaaacagatttaaagaatatccaacaaacaattcaagaagtttcagacgag
tttgatcaacaacaacaaaaggctgtttctactcaaattgccttatcaactcactacact
caagttgtcgctaacacttcaatcgagttgccacaacaatttgatctagtagccatcaaa
gacactttcaaaaagagtattgatcagttaaatgaacagattcaaatttctcaaaaactg
gcacaagaaattaaagacctagagaataatctcaaccgtcaacaacagtcgctaagccaa
gataaatcagaactagacaaattgactgctcaaatccaaactcgagaaaacgacttgcaa
actaaatccgctgacttatccgattcaaccactactagccaacaattaattaccaaaaag
aacgaattagtttcagcatatgagaagttccaaaaggatttgaaagttgctcaagatgct
gcccacaaaaacgaaattaactatagtaacaatcaaactaaactaacagatactcaaaca
caactagacaagttaacaactagtttgagaaatctctctgataaattgcatcaagcactt
aatgccgacaacgctaaaactaatgatcgtaatttactagacagatggattttagaaatt
tctcaaaatcaactaagcaaacttcaaaacgatgtcactagctatcaaaaagaaaaagaa
attttaactgacaatatttctaaagtaacagctcagctaaaagatcaaactaagcctgat
attgtcgccttaaagcaagctaaagttgaagctgaacaaactcacttgattgctgccaaa
caaactaattcattcagtcatgatttaaaagaagctacccaaaacttcgaacaagttcaa
aaaattcttcaagctcaaggcaactttaccaaggaattagctgctatcactagcctttac
aacattgtcactggtaaagacggcaatgaaaataaattaaagctagaaacttatgtcgtt
caaaactacttattaaagattttgaattacgctaaccgcaaattcttaagtatcctttct
aacgaccgttattatttccaactatcgaccgaaagtactaataagcaacgtgatcacggt
ctggatatcaatatttatgaccgtcaaacgaatgctacccgttcttccgacacactttct
ggtggtgaaactttcattgccgccttatcgattgctctgtcattgagtgaagtcgttcaa
tcatcagctaacggagttcaaatcgatgcgctattcattgatgagggctttggctcattg
gatgaagaaacacttaacgaagcaatgaaagctctgactgaaatcggtcaaaaccggatg
gtcggcgttatcagtcatatcgaatcaatgaaacaaagtatcggtcaacaactcttagtc
caaaaagtcggtaatggtaagagtacgatcaaaataattactaagtaa
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