Companilactobacillus farciminis: LF20184_01460
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Entry
LF20184_01460 CDS
T06098
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lfm
Companilactobacillus farciminis
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_01460
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LF20184_01460
Archaeal homologous recombinant proteins
LF20184_01460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Ribosomal_S30AE
BORCS7
Motif
Other DBs
NCBI-ProteinID:
ATO45506
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All DBs
Position
complement(311371..312561)
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AA seq
396 aa
AA seq
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MKLLHTADWHIGRTLNGYPLLDEQRETFKQILDIAKQEQVDGIVIAGDIYDRAIPNPEAV
TTLDEMFRKINLENHLPIYAISGNHDSAKRLNYGRAWMKQSDFYLNTFIEEAFTPIETPQ
AQIFLLPFFDPMDARTYYGHHDMPNEQVQEIKTISQAMNLVVADMKKNFDPNKKHLLVTH
FAVTPNQDTELELTSETNSKVGGLATLTSDEFSDFDYVMLGHIHTRFASPTDNIRYSGSP
VKFNVKEARIKNKGKGVDIVTIDDNGINREFKPLTPKTDLIVLEEDWDTLCDEKFYSQQP
LDSAWFAITIKNFDPSEHVHTNIRAKLQKHYKTIVELDYQVKASDNQIQTINTNINDLSP
EETVDQFFKTITGKDLSNQQKTLVENIFNEVERARK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaactattacacactgctgactggcacattggacgaactttgaacggttacccctta
ttagatgaacaaagggaaaccttcaaacaaatcttagatattgccaagcaagaacaagtt
gacggaatcgttatcgctggagatatttacgatcgagctattcccaatcctgaagctgtt
acaactttggatgaaatgttccgcaaaatcaatttagaaaatcacttacctatttatgct
atctctggtaatcacgatagcgccaaacgtcttaattatggtcgagcttggatgaaacaa
tccgatttctatctcaatacgttcatagaagaagctttcaccccaatcgagacaccccaa
gcacaaatatttttattgccattctttgatccaatggatgctagaacttactacggtcat
cacgatatgcctaacgaacaagtccaagaaataaaaactatttctcaagcaatgaattta
gtcgttgccgatatgaaaaagaacttcgatcctaataaaaagcacttactagtaacccat
tttgccgtaacccctaatcaagataccgaactggaactaactagtgaaaccaattcaaaa
gtcggtggcttagcaactttaactagcgacgaattcagtgattttgattacgtcatgctg
ggacacattcatacccgcttcgcttctccgactgacaatattcgttattccggcagtccg
gtcaaattcaacgtcaaagaagctcgtatcaaaaacaaaggcaaaggtgtcgacattgta
acgattgacgacaatggtattaatcgtgaattcaaacctttaacacctaaaactgactta
attgtcttggaagaagattgggataccctttgtgacgagaaattttacagccaacagcca
cttgattcagcttggttcgctatcacaattaagaacttcgacccaagtgaacacgttcat
accaatatccgggccaaattacaaaagcactataagactatcgtcgaactggactatcaa
gtaaaagcaagcgacaaccaaatccaaactatcaacaccaacatcaacgacctcagtcct
gaagaaaccgtcgatcaatttttcaaaactatcactggtaaagacttatccaaccaacaa
aaaacacttgttgaaaacatcttcaacgaagtagaaagagcgcgcaaatga
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