Companilactobacillus farciminis: LF20184_03865
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Entry
LF20184_03865 CDS
T06098
Name
(GenBank) DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LF20184_03865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_03865
Enzymes [BR:
lfm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LF20184_03865
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LF20184_03865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ATO45946
LinkDB
All DBs
Position
complement(832142..832792)
Genome browser
AA seq
216 aa
AA seq
DB search
MTISKHLDQDSLSVQYLIKKDKHLAKVIQMVGPINYQLQTDAYAFLVSQIIEQMLSKKVA
QVLTLRLTNECDGLICPTKIKCLSDEQLLSIGISHSKVHYIQNLTAAILTKKVIFSDYSK
MSDSEVIDSLTTIKGIGVWSAKMFLIFSLDRPDILPFEDVAFLQSYSWVYKTHNFKKAAV
MKKCSKWHPYASIASRYMYQAKNLGLTKNVFHLYKK
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgactatttcaaaacatttagaccaagactctctttcagttcaatatttaataaaaaaa
gacaaacacctcgctaaagttattcaaatggtggggccaataaattatcaactgcaaact
gatgcctacgcttttttagtcagtcagattattgaacaaatgctttcaaaaaaggtcgca
caagtattaacacttcgtctaacaaacgaatgtgatggccttatttgtccaactaaaatt
aaatgcttatccgatgaacaattattaagtatcggtatctcacactctaaagtgcactac
attcaaaacttaacagcggcaattctaacaaagaaagtaattttttcagattactcaaaa
atgtctgattcagaagttatcgacagcttaaccacaatcaagggtatcggtgtttggtct
gccaagatgtttctgattttttcactagatcgaccagatattttgccatttgaagacgta
gccttcttacaaagttacagctgggtttacaaaactcacaatttcaaaaaagcggccgta
atgaaaaaatgttccaagtggcatccctatgcatctatcgctagtaggtatatgtatcag
gcgaaaaatctaggcttaactaaaaatgtttttcatttatacaaaaaatag
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