Companilactobacillus farciminis: LF20184_04935
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Entry
LF20184_04935 CDS
T06098
Name
(GenBank) 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lfm
Companilactobacillus farciminis
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfm03019
]
LF20184_04935
Messenger RNA biogenesis [BR:
lfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LF20184_04935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ATO46136
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All DBs
Position
1023438..1024376
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AA seq
312 aa
AA seq
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MPKHIIDFNKGENMSLEVIIKRSDFRLAKNGKNFLSLVFEDKSGQIPGKYWDASEEDAKR
FHVGAVVQLEGRRDVYQGKPQVNITRLGLLDPNTVDMSQFVQTAPMKQSDMENEFDDVFL
QITNGAWNRIVRYLFKKYHDRFFTSAAAKSNHHDFQGGLAYHTLSMVRMAESISDQYPQI
NRALLLAGACLHDFGKIIELSGSLDIEYTFEGNMLGHITIVDEEIVKAATDLDISLDSED
MILLRHMILSHHGLLEYGSPERPKLLEAEVLHNIDMMDASINMITKALDKTENGKFSERV
FGLDNRSFYKHS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgcctaagcatattatagattttaataaaggcgagaatatgagcttggaggtaattatc
aagcgttcggattttcgtttagcaaagaatggcaagaactttttatcgttagtattcgaa
gataagtcaggacaaattcctggtaaatattgggatgctagtgaagaagatgcaaagagg
tttcacgttggagcagttgtacaactagaaggccgtcgtgatgtctatcaaggcaagcca
caagtaaatatcacacgtctggggttattggacccaaatactgttgatatgtcgcaattc
gttcaaacagcacctatgaaacaaagcgatatggaaaatgaattcgacgacgtctttttg
caaattactaatggagcttggaatcgaatcgttagatatttattcaagaaatatcatgat
cgattcttcactagtgctgctgccaagagcaatcaccatgattttcaaggagggttggca
tatcacactttgagtatggtgagaatggcagagagtatctctgatcaatatccacagatc
aatcgagcacttttacttgccggagcatgcctccatgatttcggtaagatcatcgaattg
tccggtagtttagatattgaatatacttttgaaggtaacatgctaggacatatcacgatc
gtagacgaagaaatcgttaaagcggcgaccgatttggatattagtctagatagtgaagac
atgattttattgagacacatgattctgtcacaccatggcttattagaatatggttcgcca
gaacgtcctaaattgttggaagctgaagtattgcacaatattgatatgatggatgcttca
atcaatatgatcacgaaagccttggacaagactgagaatggtaaattctctgaacgtgtc
tttggactcgataatcgttcattttataaacatagttag
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