Companilactobacillus farciminis: LF20184_05010
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Entry
LF20184_05010 CDS
T06098
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm03030
DNA replication
lfm03410
Base excision repair
lfm03420
Nucleotide excision repair
lfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LF20184_05010
03410 Base excision repair
LF20184_05010
03420 Nucleotide excision repair
LF20184_05010
03440 Homologous recombination
LF20184_05010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfm03032
]
LF20184_05010
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_05010
Enzymes [BR:
lfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LF20184_05010
DNA replication proteins [BR:
lfm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LF20184_05010
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LF20184_05010
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF20184_05010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Methyltransf_PK
Motif
Other DBs
NCBI-ProteinID:
ATO46149
LinkDB
All DBs
Position
1036480..1039137
Genome browser
AA seq
885 aa
AA seq
DB search
MSKNKKLLLIDGNSVSFRAFFAMHNVLDKFVNGEGIHTNALYAFNNMLELILKDEKPTHA
LVAFDAGKTTFRTKMFDEYKGTRAKTPQELMEQLPLIQEMLNYRGIKTYELPDYEADDII
GTMSHKAELDGMDVTIITGDRDLTQLATDKVTVKVNVKGVTETESYTPEHVQEKLGITPK
QIIDMKGLMGDNSDHYPGVEKVGEKTAIKLLTQYGSVEGIYEHVDEMKKSKLKEHLINDK
DKAFLSKKLATIDLEAPVELQLTDLEYRGDNQEQLMQFYQKMNFKTFLSRMDVPQEDAAE
KLADIKVLELNDKAVEKIVNNDKVHTLVVEGFGENYHTSPIIGLLISDGENYYGTTDFSI
LENAQLKDWLADSSKEKYLFDNKATIAQLTRYGCQLSGVTFDMLLVAYLLDTNDNKQDIG
LVAKNYDINLPTEEEFYGKGVKKAVPEDDNVLLNFLAQKAQVINTLKDKMMAELKDNDQD
SLYDEIELPLSNVLAEMEIKGITVEVSKLKEMENAFATRLAKIEQEIYQEAGKEFNINSP
KQLGVVLFEDLKLPVIKKTKTGYSTSVDVLEKLKDKSPVVQKVLDYRQISKIQSTYVVGL
QKFVQPDNKIHTIYLQTLTQTGRLSSIEPNLQNIPIRIDEGKQIRKAFVPKHPDWEIFSA
DYSQVELRVLAHISGDEHMQEAFNEDYDIHAHTAMRIFGLDSTDEVTPNMRRQAKATNFG
IVYGISDYGLSQNIGISRKKAAEFIASYFEQYPGVKKYMDDIVKYARENGYVETIMHRRR
YLPDIHSRNFNIRNFAQRTAMNTPIQGSAADIIKVAMINMQKMLEKEKLQANLLLQVHDE
MIFEAPKSEIATLEKLVPSVMDSAVKLDVPLKVETAHGKTWYEAK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaataaaaaattacttttaatagatggaaacagtgtttcgtttcgggcattt
tttgcgatgcacaatgtcttagataaatttgtcaatggcgagggtatccacacaaatgcc
ttgtatgcctttaataacatgttggaactaattctaaaggatgaaaaaccaactcatgcc
ttggtggcttttgatgctggtaaaacgacttttagaactaagatgtttgacgagtacaaa
ggaactcgggccaagactcctcaagagttaatggaacagctgcctttgattcaagagatg
ttgaactatcgtggcatcaaaacttatgaattgcctgattatgaagctgacgatattatc
ggaactatgtcgcacaaagctgaattggatggtatggacgtgacgattattaccggtgac
cgtgatttgacgcaattggctactgacaaagtaactgttaaagtcaatgtcaaaggcgta
accgaaacagaaagctatacgccagaacatgttcaagaaaaattgggcattacacctaag
cagatcatcgatatgaagggtctaatgggggataattctgatcactatcctggggtagaa
aaagtcggtgaaaagactgctatcaagttgctcactcaatatggcagcgtagaaggtatt
tacgaacacgttgatgaaatgaagaagagcaagttaaaagaacatttgatcaatgataag
gacaaagctttcttgagcaagaagttagctacgattgacctagaggcaccggtcgaattg
caattgacagaccttgaatatcgtggcgacaatcaagaacaattgatgcaattttatcaa
aagatgaatttcaagactttcttgagtagaatggatgtccctcaagaagatgccgctgaa
aaattggccgatataaaagtgttggaattaaatgataaagcagttgaaaaaatcgttaat
aacgacaaagttcataccttggtcgtggaaggttttggcgaaaattatcatacttcaccg
attattggtctattgatttctgacggcgaaaactattacggtacgactgacttttcaatc
ttagaaaatgctcaattgaaggattggttggctgacagctccaaagagaagtatttattc
gataataaagcaacgattgcacaattgactcgttacggctgtcaattaagtggcgtcacg
ttcgatatgttgttagtagcttatttgttggataccaacgataacaagcaagatattggt
ttagttgccaaaaattatgatattaatttaccaactgaagaagaattttatggcaaaggg
gtcaaaaaagcagttccagaagatgataacgtcttattgaacttcttagctcaaaaagcc
caagtcatcaatactctaaaagacaaaatgatggctgaactaaaagataacgatcaagat
agtttgtacgatgagattgaattaccactgtcgaatgttttagcggaaatggaaatcaag
ggtattacggtcgaagtttctaaattaaaagagatggaaaatgcctttgctacacgtttg
gctaaaattgaacaagaaatttatcaagaagcaggtaaggaattcaacatcaattcgcct
aaacaattaggagtcgtcttgtttgaagatttgaaattaccagttattaaaaagacgaag
actggctattcaacttcagtagatgtcttggagaaattaaaagataaatcacctgtagtt
caaaaagttctcgattatcgtcaaatttcaaaaattcaatcaacttatgtcgttggttta
caaaaatttgttcaaccggacaataagattcacacgatttacttgcagactttgacacaa
acaggacgtttatcatcaattgaacctaatttgcaaaatattccaattcgaatcgatgaa
ggaaaacaaattagaaaggcctttgtaccaaaacatccggactgggaaatcttttcagcc
gattattcacaagttgagttgcgtgttttagcacacatttctggtgacgagcacatgcaa
gaagccttcaatgaagattatgatatccacgctcacacagctatgagaatctttggactt
gatagtactgatgaagtgacacctaatatgcgtcgccaagctaaagctactaatttcggt
atcgtttacggaatcagtgactacggcttatcgcaaaacatcggtatcagtcgtaaaaaa
gctgctgaatttattgcctcatattttgaacagtatcctggagtaaagaagtatatggac
gatattgtcaaatatgctcgtgaaaatggttatgttgaaacaatcatgcatcgtcgtcgt
tatttgccagatattcattctcgtaattttaatattagaaactttgctcaaagaacagcg
atgaatacgccaattcaaggtagtgcggcagatattattaaagtagcgatgatcaatatg
caaaagatgctagaaaaagaaaaattgcaagctaaccttttgttgcaagtacacgatgaa
atgatttttgaagcaccgaaatcagaaattgcaacccttgaaaaattagtgccaagtgtg
atggattcagcagtcaaactcgatgttcctttgaaagtggaaactgctcacggcaaaact
tggtatgaagcgaaatag
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