Companilactobacillus farciminis: LF20184_05290
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Entry
LF20184_05290 CDS
T06098
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LF20184_05290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_05290
Enzymes [BR:
lfm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LF20184_05290
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LF20184_05290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
DUF1657
DUF3198
ThrE
Motif
Other DBs
NCBI-ProteinID:
ATO46198
LinkDB
All DBs
Position
1086031..1086267
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AA seq
78 aa
AA seq
DB search
MAEEKKTFEENLADLEEIVKNLETGNVPLEEAMEKFKKGVTLSKELEKTLSDAEETVTKI
MTKDGQEVNMKNDQSKDE
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaaaagaaaacatttgaagaaaatttggcggatctagaagaaatcgtcaaa
aaccttgaaactgggaatgttccattggaagaagccatggaaaaattcaaaaagggtgtt
actttgagtaaagaactcgaaaagaccctcagtgatgctgaagaaacagttactaagatc
atgactaaagacggtcaagaagttaatatgaaaaatgatcaaagtaaggacgagtag
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