Companilactobacillus farciminis: LF20184_05300
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Entry
LF20184_05300 CDS
T06098
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
lfm
Companilactobacillus farciminis
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lfm03009
]
LF20184_05300
Enzymes [BR:
lfm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LF20184_05300
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LF20184_05300
Ribosome biogenesis [BR:
lfm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LF20184_05300
23S rRNA modification factors
LF20184_05300
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Methyltransf_23
Methyltransf_12
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
ATO46200
LinkDB
All DBs
Position
1087129..1087953
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AA seq
274 aa
AA seq
DB search
MAKKRIDVLLVEQNLFESREQAKRSVMAGEVYNQDNLRFDKPGEKVDPDTVFHLAKNAHS
KYVSRGGYKLEKALKSFDIDLSDRICLDIGSSTGGFTDVALQNGATKVYALDVGYNQLAW
KLRKDERVVVMERVNFRYSKPEDFHEGLPQFAMTDVSFISLELILPPMFNIILPGADAVC
LIKPQFEAGPENVGKHGIVRDHKVHQMVLEKIINFAKNTGFIVSGLDFSPIKGGEGNIEF
LMHIQKPKEAQDGEILDTVSVEKTMEAAYSNLNK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaaaaagaattgatgttttattagttgaacaaaatttattcgaatctcgtgaa
caggcgaaacgttcagtcatggctggagaagtttacaaccaagataatttacgttttgat
aaaccaggtgaaaaagtcgatccagatacagtttttcatttggctaaaaatgctcactcc
aagtatgtcagccgtggtggctacaagttggagaaggctttgaagtcatttgatatcgac
ttgtctgatcgtatctgcttggatattggttcatcaactggtggctttactgatgtagct
ttgcaaaatggtgctactaaagtttatgccttggatgttggttacaatcaattagcctgg
aaattgcgtaaggacgaacgtgttgtcgttatggaacgagttaatttccgttacagcaaa
ccagaagactttcacgaaggtttgccacaatttgcgatgactgatgtctcatttatttct
ttggaattaattttgccaccaatgtttaatattattttgcctggtgccgatgcagtttgc
ttaattaaacctcagtttgaagctggtccagaaaatgtaggaaagcacggtatcgtcagg
gatcacaaggttcatcaaatggtactagagaagattattaattttgctaaaaatactggc
tttatcgtttctggattggacttttcgccaatcaagggtggcgaaggtaatattgaattt
ttgatgcacattcaaaagcctaaagaagcacaagatggtgaaattttggacactgtttca
gtagagaaaaccatggaagcagcatactcaaatctaaacaaatag
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