Companilactobacillus farciminis: LF20184_06025
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Entry
LF20184_06025 CDS
T06098
Name
(GenBank) hypothetical protein
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
lfm
Companilactobacillus farciminis
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lfm03000
]
LF20184_06025
Transcription factors [BR:
lfm03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LF20184_06025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
FUR
HTH_26
HTH_31
FANCL_d2
HTH_Tnp_ISL3
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ATO46338
LinkDB
All DBs
Position
complement(1240657..1241622)
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AA seq
321 aa
AA seq
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MVKINAYQVARKAHVSPATVSRVLNHRSKVSIETAKKVDEAIDSLNFRVNEDDDNKHLII
VSVPELTNIFYTEILEGSKAAANAANFKLLIDQTEITDETINGFVSYIDELRVYGIILLN
QLPTKLLNVLSKHTRVVQCCEYNIESNLPAISIDDYAAAKLATEQLISSGKNKIAILNGP
HSFKYSRERERGFLKALSENHLNYNEDWNMGLPAISYDIAYPIVSQMLNSFNRPNAFFCV
SDTLGAAVISATRKYNLKIPEDISVIGFDNTVLSKIISPSLSTINQPKFQEGYTAVELLR
KSDHRKNHLFLKTELIVRETT
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggttaagataaacgcatatcaagttgcaagaaaagctcatgtttctcctgcaacagtc
tctcgagttttaaatcataggtctaaagtaagcatagaaactgcaaagaaagttgatgaa
gcaatagatagtttaaattttagagtaaatgaagacgatgacaataagcatctaattatt
gtcagtgttcctgaacttactaatattttttatactgaaattttagaaggatcaaaagct
gcagcaaatgcagcaaactttaaattattaatagatcagacagaaataaccgatgaaacc
attaatggatttgtcagttatattgatgaattgagagtttatgggatcattttgttgaat
cagttaccaaccaaactattaaacgttttgtcaaaacatacgagagtcgtacagtgttgt
gagtataatatagaatctaatttaccggcgatatcaattgatgattatgcagcggctaaa
cttgccacagagcaactaatatcttctggaaaaaataaaattgcaattcttaatggccca
cactcctttaaatattcaagggaaagagaacgtggctttttgaaggcactgtcagaaaat
cacttgaattataacgaagattggaatatgggacttcctgcaataagttacgatatagca
tatcctattgtttcccagatgcttaattcatttaacagacccaatgcattcttttgtgtt
tcagatacgttaggagcagcagtaatttcagcaaccagaaaatataatcttaaaattcca
gaagatatttcagtaattggatttgataatacggtcttgtcaaaaattattagtccatcc
ctttcaacaattaaccaaccaaaatttcaagaaggttatactgcagtagaactattacgt
aaaagcgaccatagaaagaaccatttatttttaaaaacggaattaatagttagagaaaca
acataa
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