Companilactobacillus farciminis: LF20184_06495
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Entry
LF20184_06495 CDS
T06098
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LF20184_06495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_06495
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LF20184_06495
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LF20184_06495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF5806
Motif
Other DBs
NCBI-ProteinID:
ATO46427
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Position
1335800..1336558
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AA seq
252 aa
AA seq
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MAQVPTNFFGIVVRRQRYKERDALVTILTKEYGFKTFLVRGTQTAKSKISGAVITFSYGD
YLGVVKNDGLSYLNSASNIKQFDEIVQDIELNAYATFLFDLYHEAFVDDPVPDSWYRMLF
KALLYIENGYDAQIIVNIMQMKLLSAFGVAPNMDSCVVGGETEGVFDFSVLLGGIICSKH
FDEDIHRLHIPKRIIYFLRLFSKIDLSQVGRIEIKENNKDLIQHAIDAIYLGTVGYYPKS
KTFIDKMKRVRF
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagttccaactaatttcttcggtatcgtcgttcgtaggcaacgttacaaggaa
agggatgcgctagttaccattttgactaaggagtatggattcaagacttttttagtccga
gggacccaaactgccaagtcaaagatttctggggctgtgattactttttcttatggcgat
tatttgggagtcgtcaaaaatgatggcttatcttatttgaattcagctagtaatatcaaa
caatttgatgaaatcgttcaagatatcgaattgaatgcttatgcgacctttttatttgat
ctgtatcatgaagcttttgttgatgatccagtgccagattcgtggtatcggatgttgttt
aaagctttgttatatattgaaaatggctacgatgcccagataattgttaatatcatgcag
atgaaactgttgagtgcttttggagtagctcccaatatggacagctgcgtcgttggtggc
gagactgaaggagtttttgatttttcggtcttattgggtggtattatttgttcaaagcat
tttgacgaagatattcatcgcttgcatattccgaaacgaatcatttatttcttgcgtctt
tttagtaaaatcgacctctcacaagtaggacgaatcgaaatcaaagaaaataataaagat
ttgattcagcatgcgatcgatgcgatttatttaggaactgtgggttattatcccaagagt
aaaacttttattgacaaaatgaagcgagttcgtttttag
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