Companilactobacillus farciminis: LF20184_06940
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Entry
LF20184_06940 CDS
T06098
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lfm
Companilactobacillus farciminis
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfm03032
]
LF20184_06940
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_06940
Enzymes [BR:
lfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LF20184_06940
DNA replication proteins [BR:
lfm03032
]
Prokaryotic type
DNA Topoisomerases
LF20184_06940
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LF20184_06940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ATO46507
LinkDB
All DBs
Position
complement(1440563..1442677)
Genome browser
AA seq
704 aa
AA seq
DB search
MIHWKGALYVPSTKQKNLVIVESPSKAKTIEKYLGRNYHVVASLGHVRDLPKSQMGVDIE
HDYEPKYISIRGKGPVIKDLKKEAKKAKRVYLAADPDREGEAIAWHVSHLLGLDDDDKNR
VVFNEITKDTVKQAFKTPRSIDMNLVDAQQARRVLDRLVGYSISPILWAKVKKGLSAGRV
QSIALKLVIERENEIKKFVPQEYWTIESIFKHDKDKFKANFYGLDGKKAELKNNDEVQDV
LGRVDKKKDFSIDKVTKKERKRMPAAPFTTSSLQQEANKRLNFKTRKTMMIAQQLYEGIN
LGRKEGTVGLITYMRTDSKRISKVAEAEASKFIHEEYGEPFAIIKERKDKNQEGAQDAHE
AIRPSSVFRTPASLKDILSRDQFRLYSLIWSRFVASQMTPAVFDTMTVDLSQNGVMFRAN
GSKIKFEGYRKVYQSAADKARKDNILPDLAEGDTAKLQSNDPAQHFTQPPARFTEASLVK
ALEENGVGRPSTYAPTIDTIQRRYYVKLNGKSFEPTELGEIVDNLIQAYFPDIVNIDFTA
NLEDELDHIEEGKEDWVKVVDRYYKPFAKELESAEDKIEKVQIKDEPAGMDCDICGAPMV
IKMGRYGKFYACSRFPACRNTKPIVKEIGVICPKCKKGQVIERKSKKNRIFYGCSRYPDC
DFVSWDKPINRDCPKDGHYLVEKKVKGGRQVICPNGDYEEDIQK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ctgatccattggaaaggagcactttacgtgccatcaacaaagcagaaaaatttggtgatc
gttgaatcaccatcaaaagcaaaaacaattgaaaagtacttgggacgtaattatcacgtt
gttgctagtttaggacatgttagagatctacctaagagtcaaatgggtgttgatatcgag
catgactatgaaccaaaatacatttccattcgtggtaaaggtccagtaattaaagattta
aagaaagaagctaaaaaagctaaaagagtttatctggcagccgatccggatcgtgaagga
gaagctattgcctggcacgtttcgcatttattaggtttagatgatgatgacaagaatcga
gtcgtcttcaatgaaattactaaagatactgtcaagcaagccttcaaaactcctcgttcg
atcgatatgaacttagttgatgctcaacaagctcgtcgagttttggatcgtttggttggt
tattcaatttccccaattctttgggcaaaagttaaaaagggcctcagtgccggacgtgtg
caatcaatcgctttgaaattagtgattgagcgtgaaaatgagattaagaagttcgttcct
caagaatattggacgatcgaatcgatctttaaacatgacaaagacaagttcaaggctaac
ttctacggacttgacggcaaaaaagccgaattaaagaacaatgatgaagttcaagatgtg
cttggtcgtgtcgataagaaaaaagatttctcaattgataaagttactaaaaaagaacgt
aaacgtatgcctgccgcaccatttacaactagttctttgcaacaagaagccaataagcgt
ttgaacttcaagacgagaaaaaccatgatgattgctcaacaattgtatgaaggaatcaac
ttgggacgcaaagaaggtacagttggtttaatcacatacatgcgtactgattctaagcgt
atttctaaagtcgctgaagcagaagcttcaaaattcatccatgaagaatatggcgaacct
tttgccattatcaaagagcgtaaagataagaaccaagaaggtgctcaagatgcccacgaa
gctattcgtccatcatcagtctttagaacaccagcttcgttaaaagatatcttgagtcgt
gaccaattccgcttatacagtttgatctggtcaagattcgttgccagtcaaatgacgcca
gctgtctttgatacgatgacagttgatttgtcacaaaatggcgttatgtttagagctaat
ggttcaaaaatcaagtttgaaggttaccgcaaggtttaccaaagtgctgctgataaagct
cgtaaggacaatatcttaccggacttagctgaaggtgacactgccaagcttcaatcaaat
gatccagctcaacactttacacaaccaccagcaagatttactgaagcttccttagttaaa
gctctagaagaaaatggtgttggtcgtccatcaacttatgcaccaacaatcgatacgatt
caacgtcgttactacgttaaattgaatggaaagagttttgaaccaactgagttaggtgaa
atcgtcgacaacttgattcaagcttacttcccagatatcgttaatatcgactttacagct
aacctagaagacgaactggatcatattgaagaaggcaaggaagactgggtcaaagtcgtt
gatcgctattacaagccttttgctaaagaattagagtcggctgaagataagattgaaaaa
gtgcagatcaaagatgaaccagccggtatggattgtgatatctgtggtgcaccaatggtt
atcaagatgggacgttatggtaagttttatgcttgttcacgtttcccagcttgccgcaac
actaaaccaatcgttaaagagatcggcgtaatttgtcctaaatgtaagaagggacaagtt
attgaacgtaaatcaaagaagaatcgtattttctacggttgttcaagataccctgactgt
gacttcgtttcatgggacaaaccaattaatcgtgattgtccaaaagatggtcactactta
gttgaaaagaaagttaagggtggtcgtcaagtaatctgtccaaatggagattatgaagag
gatattcaaaaataa
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