Companilactobacillus farciminis: LF20184_07075
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Entry
LF20184_07075 CDS
T06098
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lfm
Companilactobacillus farciminis
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfm03032
]
LF20184_07075
03036 Chromosome and associated proteins [BR:
lfm03036
]
LF20184_07075
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_07075
DNA replication proteins [BR:
lfm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LF20184_07075
Chromosome and associated proteins [BR:
lfm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LF20184_07075
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LF20184_07075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2780
Ribosomal_L12
Baseplate_J
Motif
Other DBs
NCBI-ProteinID:
ATO46533
LinkDB
All DBs
Position
complement(1472782..1473057)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAELIDSVASKTGLTKKDATSAVDAVFETIQENLSEGNKVQLIGFGNFEVRQRAARK
GRNPQTGEEIKIPASKVPAFKPGKALKDSVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaagctgaacttattgatagtgtcgcaagtaaaactggtttgacaaagaag
gatgcaacttctgctgttgatgcagtatttgaaactatccaagaaaacttatcagaaggt
aacaaagttcaattgattggctttggtaactttgaagttcgtcaacgtgctgctcgtaag
ggtcgtaacccacaaactggcgaagaaatcaagattccagcaagcaaggttcctgcattt
aaaccaggtaaagctttgaaggattcagttaaataa
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