Companilactobacillus farciminis: LF20184_07885
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Entry
LF20184_07885 CDS
T06098
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm00470
D-Amino acid metabolism
lfm00550
Peptidoglycan biosynthesis
lfm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LF20184_07885 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LF20184_07885 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lfm01011
]
LF20184_07885 (murD)
Enzymes [BR:
lfm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LF20184_07885 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lfm01011
]
Precursor biosynthesis
Amino acid ligase
LF20184_07885 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
2-Hacid_dh_C
HcgC
AlphaC_N
KARI_N
Pyr_redox
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
ATO46685
LinkDB
All DBs
Position
complement(1644287..1645663)
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AA seq
458 aa
AA seq
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MKKSNYSNKKILVLGLAKSGYAVAKLLKKMGSDVTVVDSNPLEGNTEAKALIDEGFNVIT
GTNSADLIDDSYDYLVKNPGIFYSNELIQRAEELMIPVITEPEIAYSFSDATMIGVTGTN
GKTTVTTLIQLMLKHSPKFENSYYAGNIGIPISDVIQKATAKDVVVTELSSFQLQGTIEL
HPHVAVLNNIYSTHLDFHKTRANYIKAKMHITKNQTKNDYFVINYNTEEWRDLAKQSDAQ
ILPFSDNQTLDKGAFVKDDVIYCNGQAVMKTDEIKIPGEHNVQNALAAISVAKLYDVSNE
DIIEVLSSFKGVKHRIQYVDTFGGHKFYNDSKATNVEATIVALTAFKQPITLIAGGLDRG
NGFDELIPSLKGKVNNLVVYGQTADKVIESAQKADVSNIVKVNNLTEAVPEAYKQSDPED
VILLSPAAASWDQFHTFEERGDLFIKEVETLKGEVNDD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagtaattattcaaataaaaagatcttagtattaggtttagccaagagtggt
tacgccgtagccaaattattgaaaaagatgggttcagatgttaccgttgtcgattctaat
ccccttgaaggcaacactgaagccaaagctttgatcgatgaaggattcaatgtgatcacg
ggtactaatagtgctgatttaattgatgattcatacgattatttggtaaaaaatcccgga
attttctattccaatgagttgattcaaagagctgaggagttgatgattccagttattact
gaaccagaaattgcttatagctttagcgatgctacaatgattggcgttactggaactaat
ggtaaaactactgtaacaactttgattcaattgatgctcaagcactcaccaaaattcgaa
aattcttattatgctggaaacatcggtattcctatctctgatgtcattcaaaaggctaca
gctaaggatgtcgttgtgactgagctttcaagctttcaactgcaaggaacgattgaatta
catccgcatgtagcagttttaaataacatctattcaactcatttggattttcataagact
cgtgcaaattacattaaggctaagatgcacattactaagaaccaaactaagaatgattac
ttcgtaattaattacaatacagaagaatggcgtgatttagctaagcaatccgatgctcaa
attttgccattttctgacaaccagactttagataaaggtgccttcgtaaaggatgatgtc
atttattgcaatggccaagcagttatgaagaccgatgaaattaagattcctggtgaacac
aatgttcagaatgccttggcagctattagcgttgctaagttgtatgatgtaagtaacgaa
gatattattgaagttctatcttcattcaaaggtgttaagcatcgtatccaatatgtcgat
acttttggtggacataaattttataatgattccaaagcaactaatgtagaagctactatc
gtcgccttgacggcctttaaacagccaatcactttgattgccggtggtctggatcgtgga
aatggattcgacgaactcattccatcattgaaaggaaaagttaataatttggtagtttat
ggtcaaactgcagataaagtgatcgaatcggctcaaaaagctgacgtaagcaacattgtt
aaagttaataatttgactgaagcggttcctgaagcatacaagcaaagcgacccagaagat
gtcatcttgctttcaccagctgcagctagttgggatcaattccacacctttgaagaacgt
ggtgacctatttattaaagaggtcgaaactttaaagggagaagttaacgatgactaa
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