Companilactobacillus farciminis: LF20184_07895
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Entry
LF20184_07895 CDS
T06098
Name
(GenBank) penicillin-binding protein
KO
K08724
penicillin-binding protein 2B
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm00550
Peptidoglycan biosynthesis
lfm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LF20184_07895
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lfm01011
]
LF20184_07895
Peptidoglycan biosynthesis and degradation proteins [BR:
lfm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LF20184_07895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
DUF4083
DUF2633
Motif
Other DBs
NCBI-ProteinID:
ATO46687
LinkDB
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Position
complement(1646660..1648828)
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AA seq
722 aa
AA seq
DB search
MSKFRKLLKNKARRNHYIVGIVILIATAFSFILFIQRFAYISMSKQYDGVNLVQKTKQKY
ERVTKVNAKRGDILDVNGDMIAGDSTIYNIYAIVDHKSKTVDGKADYVVDKDKTAQVLSK
YLSLSKKQIKKYLTPVSKKQYQVEFGPSGRGLSIEIKRKIAAKKLPGIHFIELPSRSYPN
GVFATNLVGITKADDANDKNSNISGVMGIEKYFNKVLSGKNGKQITKVDKNGNELPGSQM
VEKKSADGSNIYLTLNSKIQQYAEILAQTVEEKYEPKNLQILVMNAKTGAIEAATQRPTF
NPTTGKGLSNSWRDTLVEDQFEPGSVMKILTLSASIDSGNYDPNQLYQSGTVEVGGRTIG
DWNTAGWGYIPLSEAFTRSSNVGMVKLEQEMGSETWMEYMKKFHIGQKTGVDLPGEVSGS
ISYEHTSDQAMTSFGQSVNVNTMQMLQAFSAIANGGKMIKPQIIKKVVDADTGKTTKKFK
REVVGQPIKASTAKKVQKAMRQVVTKSYGTGVVYNVPGVKVGVKTGTAQIASPSGGYLTG
SNNYIFSVAGMIPYNDPNYIVYVTMRQPQKMTESAEKILSEVFNPLVKRLVSQGKSQTDS
VEVGSQYVSVPSLLDKSTNSALDKIKNLGLQSGVIGTGDKVVQQLPDSGQKVMPGQRMVL
LTNGAMTMPDLNGWSKNDVLKFAEITGKQVTTKGDGYVVKQSVEAGHVINDSGKIIVTLK
NK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagttcagaaaattattaaaaaataaggcaagacgcaatcattatattgttggg
atagtaatcttgattgcgactgccttttcttttatcctttttatccaaagattcgcctat
atctcaatgagtaagcaatatgacggcgttaatttggtgcaaaagacgaaacaaaaatat
gaacgagtaacaaaagtcaatgccaagcgtggcgatatccttgatgttaatggggatatg
attgctggagattcaactatttacaatatttatgcgattgtagaccataaatcaaaaaca
gttgatggcaaggcagattatgtagttgataaggacaagacagcccaagttttgagtaag
tacttatctttatcaaagaaacagattaagaagtatttgactccggtaagcaaaaaacag
taccaagtagagtttggaccatctggtcgtgggttatcgattgaaataaagcgtaagatt
gcggccaaaaaattaccagggattcatttcattgaattaccttcgagatcttatcctaat
ggtgtctttgcgactaatttagtcggtatcactaaagctgacgatgctaacgataaaaac
agcaatatcagtggtgtcatgggaatcgaaaagtatttcaataaggttttatctggtaaa
aatggtaagcagatcactaaagtcgataaaaatggcaatgaattaccaggttcacagatg
gtcgaaaagaaatctgctgatggatcgaatatttatttaacattaaatagtaagattcaa
cagtatgctgaaattttggcacagactgttgaagaaaaatatgaaccaaagaatctacag
attttagtaatgaatgccaaaactggtgcgattgaagcggccacacaacgcccaaccttt
aatcctacaactggtaaaggtctcagcaatagctggcgtgatactttagttgaagatcaa
tttgaaccaggatcagtcatgaagattttgactttgtcagcttcgatagattctggaaat
tatgatcctaatcaactttatcaatcaggtacagtcgaagtcggtggtcgaacaattggt
gactggaatactgctggatggggatacattcctctatcagaagccttcactagatcttct
aacgtcggaatggtcaagctggaacaagaaatgggctcagagacctggatggaatacatg
aagaaattccatattggtcaaaagactggcgttgatttaccaggggaagtttcaggtagt
atttcttatgagcacactagtgatcaagcgatgacttcatttggtcaaagtgtcaacgtt
aatactatgcaaatgttacaggctttctcagctatcgctaatggcggcaagatgatcaag
ccacaaatcattaaaaaagttgttgatgctgatactggtaagacaactaagaaatttaag
cgtgaagtagtggggcagccaatcaaagcaagtaccgctaaaaaagttcaaaaggcaatg
cgccaagttgtaacgaagagttatggaactggggtagtttataatgtacctggagtaaaa
gtcggtgtaaaaactggtactgctcaaatcgcctcaccaagtggtggatatttaacaggt
tcaaacaattatatcttctccgttgccgggatgattccatataatgatcctaattacatt
gtttatgtcacgatgagacaacctcaaaagatgaccgaatcggctgaaaaaatcttgtct
gaagtctttaatcctttagttaaacgtttagttagccaaggaaaatcacagactgattca
gtagaagtgggcagtcaatatgtgagtgtaccaagtcttttggacaagtcgacgaactca
gctttggataaaattaagaatttgggattgcaatcaggtgtaattggtactggtgacaaa
gttgtccaacaattgcctgatagtggtcaaaaagtcatgccgggtcaaagaatggtcttg
ttgactaacggcgctatgacgatgccagatcttaatggttggtcgaagaatgacgttttg
aagtttgctgaaatcactggtaaacaagtcacgaccaaaggcgacggatatgtcgttaaa
cagtcggttgaggctggtcatgtgataaatgacagtggtaaaattatagttacattgaaa
aataaataa
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