Companilactobacillus farciminis: LF20184_07955
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Entry
LF20184_07955 CDS
T06098
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LF20184_07955
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lfm01007
]
LF20184_07955
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfm03016
]
LF20184_07955
Enzymes [BR:
lfm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
LF20184_07955
Amino acid related enzymes [BR:
lfm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
LF20184_07955
Transfer RNA biogenesis [BR:
lfm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LF20184_07955
Prokaryotic type
LF20184_07955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
ABC_tran_CTD
MYO10_CC
FapA
DUF1664
Motif
Other DBs
NCBI-ProteinID:
ATO46699
LinkDB
All DBs
Position
complement(1657738..1660386)
Genome browser
AA seq
882 aa
AA seq
DB search
MREIDMDTKYNPQEVEEGRYQTWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWD
TTIQDTLIRYKRMQGFDTLYLPGMDHAGIATQAKVEAKLREQGISRYDLGREKFVDEVWK
WKDEFASIIKSQWGKLGLSLDYSRERFTLDEGLSKAVRKVFVKLYNEGLIYRGEYIINWD
PQLQTALSDIEVIHKDDQGAFYHVKYPYADGSGYIEIATTRPETMFGDVAVAVAPDDDRY
KDIVGKEIIVPLVDRKIPIITDHYVDKEFGTGMVKITPAHDPNDFAVGNRHDLKRINTMN
ADGTMNENAGKYNGMDRFEARKAIVKDLQDEGYMINIEPYVHSVGHSERSGVQVEPRLST
QWFVKMKPLAEMALKNQKGDDKVNFVPDRFEDTFTQWMENVHDWVISRQLWWGHQIPAWY
NKKTGETYVGEEAPKDIENWDQEQDVLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTNTL
VTGYDIIFFWVSRMIFQSLKFTGKKPFDHVVIHGLIRDEQGRKMSKSLGNGIDPMDVIQK
YGADALRWFLMNGSTPGQDTRFSYDKMDSAWNFINKIWNASRYVIMNLDDDTPAMDDLSQ
VTSYDLSDKWILAKLNHTVKEVNRLMDNFEFGEVGRNLYNFIWNDFCDWYIEMSKATLTG
DDEAAKKQKKMILTYVLDQTLRLMHPIMPFVTEKIWLTMPHNGKSIMQAKYPENHAEFDD
ADAMNQMDVLIDLIKSLRKIRLEANAPMSKAVDILIKPQDDKVKDVVLNNKEYIDRFMHP
KDLKVATDIEAPALAMTAVTNGAELYVPLAELINIDDEIARQNEEIAKLDKEIERINKKL
SNKNFVQKAPEKVVAEQKEKLADYQSRQAKVQQRIQQLQANK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatcgacatggatacaaaatacaatcctcaagaagtcgaagaaggtcgttat
caaacttggttagatgaagacgtcttcaaaccttctggagataagaaagctaaaccttat
tcaatcgttatcccaccacccaatgttactggtaagttgcacttgggtcacgcttgggac
acaacgattcaagatactttgattcgttacaagagaatgcaagggttcgatactttatac
ctaccaggtatggatcacgccggaattgctactcaagctaaagttgaggctaaattacgt
gaacaaggaatttctcgttacgatctaggtcgtgagaagttcgttgatgaagtttggaag
tggaaagatgaattcgcttctatcatcaaatcacaatggggtaaattaggactttcattg
gattattcacgtgaaagatttactttggacgaaggcttgtcaaaggctgttcgcaaggtc
tttgttaagttgtataacgaaggtttgatctaccgtggcgaatacattatcaactgggat
ccacaactacaaacagctttgtcagatatcgaagttatccacaaggacgatcaaggtgct
ttctaccacgttaagtatccatatgccgatggttcaggttacattgaaattgctacaaca
cgtccagaaactatgtttggtgatgttgccgtagctgttgctcctgatgatgacagatac
aaggatatcgtcggtaaggaaatcatcgtgccattagttgaccgtaagattccaattatt
actgaccactacgttgataaagaatttggtactggtatggttaaaatcactccagctcat
gaccctaacgactttgcggttggtaatcgtcatgacttgaaacgtatcaacacaatgaac
gctgacggtacaatgaacgaaaatgctggtaaatacaacggcatggatcgttttgaagct
agaaaggctatcgtaaaagacctacaagatgaaggttacatgatcaatattgaaccttac
gttcacagtgttggacattcagaacgttctggcgtacaagttgagccaagactttcaaca
caatggttcgttaagatgaagccacttgcagaaatggctttgaagaaccaaaagggtgat
gacaaagttaactttgtacctgaccgttttgaagataccttcacacaatggatggaaaat
gttcacgattgggttatttctcgtcaactatggtggggacaccaaatcccagcttggtac
aacaagaagactggtgaaacttacgttggtgaagaagcacctaaggatattgaaaactgg
gatcaagaacaagacgtgcttgatacttggttctcaagtgctctatggccattttcaact
atgggttggccagatactgacgcagaagacttcaagcgttacttcccaactaatacttta
gttactggttacgatattattttcttctgggtttcaagaatgattttccaaagtttgaaa
tttacaggtaagaaaccatttgaccacgttgttatccacggtttgattcgtgatgaacaa
ggtcgcaagatgagtaaatcacttggcaatggtatcgatccaatggatgttatccaaaaa
tacggtgccgatgctttgcgttggttcttgatgaatggttcaactccaggacaagataca
agattcagttatgacaagatggactctgcttggaactttatcaataaaatctggaatgct
tctcgttacgttatcatgaaccttgacgatgacactccagctatggacgatttgtcacag
gtaactagttatgacttatctgataagtggatcttggccaaattaaaccacactgttaaa
gaagttaatcgtttgatggacaactttgaatttggtgaagttggtcgtaatctttacaac
tttatttggaacgatttctgtgactggtacatcgaaatgagtaaagctactctaactggt
gatgatgaagctgctaagaaacaaaagaagatgatcttgacttatgtcttggatcaaact
ttgagattgatgcacccaatcatgccatttgttactgaaaagatttggctaacaatgcct
cacaacggcaagtcaatcatgcaagctaagtatcccgaaaatcatgctgaatttgacgat
gctgatgctatgaatcaaatggatgttttgatcgatttgatcaagtccctaagaaagatc
cgtttggaagctaatgccccaatgtctaaagctgttgatatcttgatcaaacctcaagac
gacaaggttaaagatgtggtcttgaacaacaaggaatacatcgaccgcttcatgcatcca
aaggacttgaaagttgcaactgacatcgaagccccagctctagcaatgactgctgttact
aatggtgctgaattgtacgttccattggctgaattgatcaacattgatgatgaaattgct
cgtcaaaatgaagaaatagctaaacttgacaaagaaattgaacgtatcaacaagaaactt
tctaacaagaacttcgtacaaaaggctcctgaaaaagttgttgctgaacaaaaagaaaaa
ttggctgattatcaatcacgtcaagccaaagtacaacaaagaattcaacaattacaagct
aataaataa
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