Companilactobacillus farciminis: LF20184_08790
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Entry
LF20184_08790 CDS
T06098
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm03420
Nucleotide excision repair
lfm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF20184_08790
03430 Mismatch repair
LF20184_08790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_08790
Enzymes [BR:
lfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LF20184_08790
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF20184_08790
MMR (mismatch excision repair)
Other MMR factors
LF20184_08790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
GNAT_acetyltr_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
ATO46853
LinkDB
All DBs
Position
complement(1826563..1828845)
Genome browser
AA seq
760 aa
AA seq
DB search
MKFSNEQIAILENDFTKPLLVNACAGAGKTTIFILMALIAIAKGNADPDEILGITFSHKS
RVDMGDRYNKFVNELSETGLELADGHPNFTTFHALFYQLLRQNQEYQQARVLTSYRLFTR
DLGDTIKHPSTMITKSEMLEQMFNLNEYLINQDLTSDGILPREADVSLTAAIEKMAGFSR
QSHDENFYSDYVDVMAKYRELKRQNGYIDFNDMKMLLLKSMEDPNYLQFYQRIMSRYKIA
VIDEFQDIDNLQWKIISKLLSPETMEHLIVIGDDDQSIYAFRGSNPKFILNYKKLLPNAQ
KKNLSTNYRTGEKILQKVIPLIKENHVRLDKDLLSGKTGVGNFVLYSSKKSGFSRKSKML
KHLVKQINDPDIDNEDIAILVRYNSSRMLLADWLANKEIYADINNASAILQNNLIYRIIT
ELMKALWKDEYKYFSEQSNRIGFSKYKNHTQKVEARADDKFRKLSKYLLAAESYNAEFNT
PLKRTDEKVQIYFNSIKRFKKRMEQADNQESQEKIAKALIKDLLQAAIKLTDKYFDYMIQ
KKFMAKSEVNEIKNYLEEELETYSNIDDFFFDEEQKKSILSSQVERNKQEHHIQFLSLHQ
AKGLEFKYVYLYGLTNKEVEKPGLSINEWFPPNMTFEQFTKKWSLVYNKSYEYLGTALGA
TRIDDYQDFWKNNAFNPINLKATLNKKKETIMFHNFYQEVKNYSEFIEEERRLLYVGVTR
AQEELCMRIAPDSNPLLFELNLPKKKKKVNGVKNENTSHN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctccaatgaacaaattgctattttggaaaatgattttactaagccgttacta
gttaatgcttgtgctggagctggtaaaacaacgatttttattttaatggctttgattgct
attgctaaaggtaacgccgaccctgatgaaattttaggaattactttttctcataaatca
cgggtcgatatgggtgatcggtacaataaatttgtaaacgaattgagtgaaacaggactg
gaattggcagacggtcatcccaatttcactacttttcatgccttgttttatcaattatta
cgtcaaaatcaggaatatcaacaagcacgggttttaacgagttatcgtttgttcactagg
gatttgggcgatacgatcaaacatcccagcacgatgattacaaagtcagaaatgttggaa
caaatgtttaatcttaatgagtacttgatcaatcaagatttaactagtgacgggatttta
cctcgagaagctgatgtttcattgacggcagctattgagaagatggcgggattttctaga
caaagtcatgatgaaaacttttattctgattacgttgatgtaatggcaaaatatcgcgag
ttgaaacgccaaaacggctatatcgattttaatgatatgaagatgttgctgttgaaaagt
atggaagatcctaattacttacagttttatcaacgcatcatgtcacgttataagattgct
gtgattgatgagttccaagatatcgacaacttacagtggaaaattatttcgaaattgctc
agccccgaaacaatggaacatctgatcgttattggagatgatgaccaaagtatttatgcc
tttcgtggcagtaatccaaaatttattttgaactataagaaattattgcctaacgctcag
aagaaaaatctttcaactaattatcgaactggcgagaagattctccaaaaagttattcct
ttgattaaagaaaatcacgttcgtttagataaagatttgctctcaggaaaaaccggtgtc
ggtaattttgtactttatagtagcaagaagtctggtttcagtcgcaagtccaagatgctc
aaacatttggtcaaacaaatcaatgatcctgatattgataacgaagacattgccatttta
gttcgctataattcttcacgaatgttgctggctgattggttagctaataaagaaatttac
gctgatattaacaatgctagtgccattttgcagaataatttaatttatcgaattattact
gaattgatgaaagctttgtggaaagatgagtacaagtatttttctgaacagtcgaatcga
atcggcttcagtaagtacaagaatcatacccaaaaagttgaagctcgtgctgatgataaa
tttcgtaaattaagtaagtacttgttagcggcagagagttacaacgctgaattcaatacg
cctttgaagagaaccgatgaaaaagttcaaatttatttcaacagtatcaagcgtttcaag
aagagaatggaacaggccgacaatcaagaaagccaagaaaaaatcgctaaggctttgatc
aaggacttgttacaagcggctatcaagttaactgacaaatactttgattacatgattcaa
aagaaattcatggccaaatctgaagtcaatgaaattaagaattatctggaagaagaatta
gaaacatatagcaatatcgacgacttcttctttgatgaggaacaaaaaaagtcaatttta
tctagtcaggtggaacggaacaagcaagaacatcacattcaattcttatctttgcaccaa
gctaaaggactagagttcaagtatgtttatttgtatggtttgacgaacaaagaagttgaa
aaaccaggactatcgatcaatgaatggttcccaccaaatatgacttttgaacaatttacg
aaaaaatggagtctagtttataacaagagttatgaatatttggggacggctctgggggca
acgagaattgatgattaccaagacttttggaagaataacgcctttaatccaatcaatttg
aaagcaacattgaataaaaagaaagaaacaatcatgtttcacaatttttatcaagaagtt
aaaaactactcagaattcattgaagaagaaagacggttgttgtatgttggagttactcga
gcacaagaggagttgtgtatgaggatagcaccagattccaatccgttgttgtttgaatta
aatttgccaaagaaaaagaaaaaagtgaatggggtaaaaaatgaaaatacgtcgcacaat
tga
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