Companilactobacillus farciminis: LF20184_09075
Help
Entry
LF20184_09075 CDS
T06098
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm03030
DNA replication
lfm03430
Mismatch repair
lfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LF20184_09075
03430 Mismatch repair
LF20184_09075
03440 Homologous recombination
LF20184_09075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfm03032
]
LF20184_09075
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_09075
Enzymes [BR:
lfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LF20184_09075
DNA replication proteins [BR:
lfm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LF20184_09075
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LF20184_09075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ATO46908
LinkDB
All DBs
Position
1888050..1888583
Genome browser
AA seq
177 aa
AA seq
DB search
MNFVAMDFETANGKRSSACSLALVLVRDNKIVDNFYTLINPREVFSPRNIQIHHITPQDV
QDAPTFDQVWPHIESLFDNSHLVAAHNASFDNSVLKNTLTNYGIMVPNYLTIDTLRTSRK
FYPDFPNHKLNTVSKALNIDLKNHHNALADSVACAEILLKTEQEFGTEQIKKMIKLT
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgtcgccatggattttgaaacagccaacggtaaacgttccagtgcttgttca
ttagccttagttctcgtgcgagacaacaaaatcgtggataacttttatactttgatcaat
ccaagagaagtttttagcccacgcaacattcaaattcatcacataacgcctcaagacgtt
caagatgcaccaacctttgatcaagtttggccacatatcgagtcgttatttgacaacagt
cacctcgttgcggctcacaatgccagttttgacaatagcgttttgaaaaataccctaact
aattacggtattatggttccaaattatttgaccatcgatactttgagaacgagtcgcaag
ttttatccagatttccctaatcataagttaaatactgtttctaaagccttaaacatcgat
ttgaaaaatcaccataacgccttagccgatagtgtcgcttgtgccgaaattttgcttaaa
accgagcaagagtttggaacagaacaaataaaaaagatgattaagcttacttaa
DBGET
integrated database retrieval system
