Companilactobacillus farciminis: LF20184_09530
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Entry
LF20184_09530 CDS
T06098
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LF20184_09530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfm03019
]
LF20184_09530
03110 Chaperones and folding catalysts [BR:
lfm03110
]
LF20184_09530
03029 Mitochondrial biogenesis [BR:
lfm03029
]
LF20184_09530
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lfm04147
]
LF20184_09530
Enzymes [BR:
lfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LF20184_09530
Messenger RNA biogenesis [BR:
lfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LF20184_09530
Chaperones and folding catalysts [BR:
lfm03110
]
Heat shock proteins
HSP60 / Chaperonin
LF20184_09530
Mitochondrial biogenesis [BR:
lfm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LF20184_09530
Exosome [BR:
lfm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LF20184_09530
Exosomal proteins of other body fluids (saliva and urine)
LF20184_09530
Exosomal proteins of breast cancer cells
LF20184_09530
Exosomal proteins of colorectal cancer cells
LF20184_09530
Exosomal proteins of bladder cancer cells
LF20184_09530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ATO46963
LinkDB
All DBs
Position
complement(1960759..1962396)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKQIKFSEDARSKMMDGVNKLADTVKTTIGPKGRNVVLEKNYGSPEITNDGVTIAKSIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVKEGMKNVTAGANPVGIRTGIE
KATNAAVDELHKISHKVSGKNDIAQVASVSSASEETGKLIADAMEKVGNDGVITIEESKG
IDTTLDVVEGMQFDRGYISQYMVTDNDKMEADLDNPYILITDKKISNIQDILPLLQKIVQ
QGKALLIIADDIDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAQLEDIATLTGGTVIT
SDLGLELKDTTMDQLGQAGKVTVTKDNTTIVEGSGNKDAINERVDLLKKQISESTSDFDK
EKLQERLAKLAGGVAVVKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALMNV
LGKVKELKAEGDVQTGINIVARALEEPLRQIAENAGYEGSVIVEHIKNQENEIGFNAATD
KWENMVEAGIIDPTKVTRSALQNAASVASLLLTTEAVVADKPEPKDNNAAPAAGNPAAGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaaattaagttttcagaagatgcacgttcaaagatgatggacggtgttaac
aaattagctgacacagttaagacaacaatcggacctaagggtagaaacgttgttcttgaa
aagaattacggttcaccagaaatcacaaacgatggtgttacaatcgccaagagcatcgaa
ctagaagaccactttgaaaacatgggtgcaaagctagtttctgaagtagcttcaaagaca
aatgacattgccggtgacggtactactacagctactgttttgacacaagcaatcgttaaa
gaaggtatgaagaacgttacagccggtgctaaccctgttggtatcagaactggtatcgaa
aaggctacaaacgctgcagttgatgaacttcacaagatttcacacaaggtttcaggcaag
aatgatattgctcaagtagcttcagtttcatcagctagtgaagaaacaggtaagttgatc
gctgacgccatggaaaaagttggtaacgatggtgttatcacaattgaagaatcaaagggt
atcgatacaactctagacgttgttgaaggtatgcaatttgatcgtggatacatttcacaa
tacatggttacagataacgacaagatggaagctgacctcgacaatccttacatcttgatc
acagacaagaagatttcaaacatccaagatatcttgccattactacaaaagattgttcaa
caaggtaaggcattgcttatcattgctgatgatattgatggtgaagcattaccaacactt
gttttgaacaagattcgtggtacattcaacgtcgttgctgttaaggctcctggctttggt
gaccgtcgtaaggctcaactagaagatatcgctacattaactggtggtacagttattact
tctgatcttggtcttgaactaaaagacacaacaatggatcaattaggccaagctggtaag
gttactgttacaaaggacaacacaacaatcgttgaaggttcaggtaacaaggatgctatc
aacgaacgtgttgacctattgaagaaacaaatttctgaatcaacatcagacttcgacaaa
gaaaaattacaagaacgtctagctaaattagctggtggtgttgctgttgttaaagtcggt
gctgctactgaaacagaactaaaagaacgcaaatacagaattgaagatgctctaaatgct
acacgtgccgctgttgaagaaggctacgttgctggtggtggtacagctttgatgaatgta
cttggcaaggttaaagaattaaaggctgaaggcgacgttcaaacaggtatcaacatcgtt
gcccgtgctttggaagaaccattacgtcaaatagctgaaaacgctggttacgaaggttca
gttatcgttgaacacatcaagaaccaagaaaacgaaattggtttcaacgctgctactgac
aagtgggaaaacatggttgaagccggaatcatcgacccaactaaggtaacacgttcagca
ctacaaaatgctgccagtgttgcatcactattgttgacaacagaagcagttgttgctgac
aagccagaaccaaaggataacaatgctgcacccgctgctggtaaccctgctgccggtggt
atgggcggtatgatgtaa
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