KEGG   Companilactobacillus farciminis: LF20184_09615
Entry
LF20184_09615     CDS       T06098                                 
Name
(GenBank) type II CRISPR RNA-guided endonuclease Cas9
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
lfm  Companilactobacillus farciminis
Brite
KEGG Orthology (KO) [BR:lfm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lfm02048]
    LF20184_09615
Prokaryotic defense system [BR:lfm02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    LF20184_09615
SSDB
Motif
Pfam: CRISPR_Cas9_WED Cas9_PI2 HNH_4 RuvC_III Cas9_a Cas9_RuvC HNH_5 HNH ADH_Fe_C
Other DBs
NCBI-ProteinID: ATO46979
LinkDB
Position
complement(1977970..1981350)
AA seq 1126 aa
MADRISLGLDIGVASVGFSVLDIDKGKVIELGARLFSATVAAGNQDRRDMRGARRLLNRN
KQRRQDTGKLFKKFGLIDDFDKGSFYDNFNQNLNPYELRVKGLTEQLTKEELAESLYQIV
KHRGISYALKDADVDEGGTDYSVSLKINSQELAEKTPAQIQLQRLNDYGKVRGQVVIGDD
PDNQKVLLNVFPTSAYEKEAKQIIATQQQFYPESLTDKFTEEYCQILTRKRDYFVGPGNE
KSRTDYGIYKTDGRTLDNLFEELIGHDKIYPEELRASAASYTAQLFNVLNDLNNLRILNY
EDGKLTKEDKEKIIAEIKNNTTTINMLNVIKKVAGCSKDDIKGFRVNEKDKPEISSMPVY
RKIHKDLLKAGVDISDWPVEFIDELSFILTLNTENGEIRKQLNNRLAPKFDFLNADLIQL
IIDNKDSFEIKTNNKWHRFSVKTMNKLIPEMMERPVEQMTLLNEMGLVKKDKKRFENNKY
LPYKEIAKDIFNPVASKSVREALKIVNAVLKKYGHIDYLVVEMPRDKNLKEEQDNIKEFQ
NKNKKAKDAAFEAFVKSVGSEQRVKEALSKNRKLQMKMRLWYQQQEIDPYNGKTIDATDL
INNPDKFEIDHIIPQSISFYDSINNKTLCFASMNQVKGQKTPYEFMLEGHGQSYDKFKAT
VMANKNFGKAKRANYLFEENVSDIETRKRFLSRNLVDTRYSSRVVLNSLQDFFREKSADT
KVTVIRGKFTSNMRKHWHIDKTRETFHHHAIDASIIAATPFLRMWKKGGTIFPVKVGEES
IDIETGEILDDKNFDKAMYEEPYSGFVSEIMNADDRIKFSHQVDKKMNRKVSDATIYSTR
TGKLAKDKKDAEYIVAKVKDIYSVDGFKKFKKVYDKDKTKFLLYKYDPRTFSKLERIISD
CPDKVEKVQTNGKVKAVDISPFEMYRRDHGMIKKYSKKGNGPAIKQLKYLDKKLGSHIDI
TPANANGKHVILQSLKPWRTDVYLNHETGEYEIMGIKYSDLKFNKNEGYGIKKDKYLEIK
KVEEVSEKSEFMFSLYRKDRVKVQDMKTGESVELLFWSRNFSNKKYAELKPISQAENDKK
LPVYGKGRLIKRLIPKNCKIWKVNTTILGDPYYLEKESDSPKDILD
NT seq 3381 nt   +upstreamnt  +downstreamnt
atggcagataggatcagtttgggtttggatattggtgtagcctcggtcggattcagcgtt
ttggatatcgacaaaggaaaagttatcgaattaggagctagattattcagtgcgacagtt
gccgctggaaaccaagatcgtcgtgatatgcgtggtgctagacgattattgaatcgtaat
aaacaacgtcgtcaagatactggtaaattatttaaaaagtttggtttaatagacgatttt
gataaagggagtttttatgacaattttaatcagaatttgaatccttatgagttgcgagtt
aaaggattgactgaacaactaaccaaagaagaattggccgagagtttgtatcagattgtt
aaacatcgtgggattagctatgctctaaaagacgccgatgttgatgaaggtggaactgat
tattcagttagtttaaaaatcaatagtcaagaattggctgagaaaactccagctcaaatt
caattacaacgtttaaatgattatggcaaagttagaggacaagtggttattggagatgat
cctgataatcaaaaagtattattaaatgtttttccaacgagtgcttatgaaaaagaagct
aagcaaatcattgctacgcaacaacaattttatccagaaagtttgaccgataaatttact
gaagagtattgtcaaattttgacaagaaaaagagattactttgttggacctggtaatgaa
aaatctcggactgattatggaatttataaaaccgatggtcggactttggataatttgttc
gaggaattaattggtcatgataaaatttaccctgaagaattaagagcctcagctgcgtcc
tatactgcacaattatttaatgtattgaacgacttgaataatttgagaattttgaattat
gaagatggaaaattaactaaagaagacaaagaaaaaatcattgccgaaataaagaataat
acgacaacgataaatatgttaaacgttattaaaaaagtcgctggctgttcaaaagatgac
attaagggattccgtgttaatgaaaaggacaaaccagaaatcagctcaatgcccgtttat
cgtaaaattcataaggacttacttaaagctggagtggatattagcgattggccagttgaa
tttattgatgaattaagttttattttgactttaaatactgaaaatggtgaaatcagaaaa
caacttaataatcgtctagctcctaaatttgattttttgaatgctgatctaattcagttg
attattgataataaagatagttttgaaattaagactaataataagtggcatcgtttctca
gtgaagacaatgaataaattgattcctgaaatgatggaacgtcctgttgaacagatgact
ttgttgaatgaaatgggtttggtcaaaaaagataagaagcgtttcgagaataacaagtat
ttaccttacaaagaaattgctaaagatatcttcaatccagttgcatctaaatcagttcgt
gaagctttgaaaattgttaatgcagttttgaagaaatacggacacattgactatttagtt
gttgaaatgcctcgtgataagaacttaaaagaagaacaagataacattaaagaatttcaa
aataaaaataaaaaggccaaagatgctgccttcgaagcttttgttaaatcagttggtagt
gaacaaagagtaaaagaagctttgagtaagaatcgtaaattacaaatgaagatgcgtctt
tggtatcaacaacaagaaattgatccatataatggcaaaacaatcgatgcaactgatttg
atcaataatcctgacaaatttgaaattgatcacattattccacaatcaatttctttctac
gatagtatcaataataagacattgtgctttgcttcaatgaatcaagtaaaaggtcaaaaa
acaccgtatgaatttatgcttgaaggtcacggacaaagttatgacaaattcaaagctact
gtaatggcaaacaagaactttggtaaagctaaacgtgctaactatttgtttgaagaaaat
gtcagtgatattgaaacaagaaagagattcttatcacgtaatttagttgatacaagatat
tcttctcgagtagtacttaatagtttgcaagacttcttccgtgaaaagtcagctgatact
aaggtgacagttattcgtggtaagtttacttctaacatgcgtaagcattggcacattgat
aaaactcgtgaaactttccatcaccacgcaattgatgcctcaattattgctgctactcca
tttttgagaatgtggaaaaaaggcggcacaatttttccagttaaagtcggtgaagaatca
atcgatattgaaaccggtgaaattttagatgataagaattttgataaagctatgtatgaa
gaaccttacagtggctttgtttctgaaatcatgaatgcagatgatcgaatcaaattctca
catcaagttgataagaagatgaatcgtaaggtaagtgatgcaacgatttattcaactcga
actggtaaattggccaaagataaaaaagatgctgagtatatcgtagctaaagtgaaagat
atttatagtgttgatggctttaagaaatttaagaaagtttatgataaagataagactaag
ttcttattgtacaagtatgatcctagaactttctccaagttggaaagaatcataagcgac
tgtccagataaagttgaaaaggtacagacaaatggaaaggtcaaagctgtggacatcagc
ccatttgaaatgtatcgaagagatcatggaatgattaagaagtattcaaagaaaggtaat
ggaccagccattaagcaacttaagtatcttgataagaaactcggttcacatattgacatc
acaccagctaatgccaatggtaaacacgttatacttcaatcgttgaaaccttggagaacc
gatgtgtatttgaatcatgaaactggtgaatatgagatcatgggaattaagtattctgat
ttgaagtttaacaaaaatgaaggatacggaatcaagaaagataagtatttggaaattaag
aaggttgaagaagtatctgaaaaatctgagtttatgtttagtttatatcgaaaagataga
gttaaagtacaagatatgaaaaccggcgaatcagtggaattattattctggtcgagaaac
ttttctaataaaaaatatgcagaattgaaaccaatatctcaggcagaaaatgataaaaaa
ttgccagtttatggaaaaggccgcttaattaagcgattaatacccaaaaattgtaagatt
tggaaagtaaatacaactattttaggagatccatattacttagaaaaagaatccgatagt
ccaaaagatatccttgattaa

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