Companilactobacillus farciminis: LF20184_09695
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Entry
LF20184_09695 CDS
T06098
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm03030
DNA replication
lfm03430
Mismatch repair
lfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LF20184_09695
03430 Mismatch repair
LF20184_09695
03440 Homologous recombination
LF20184_09695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfm03032
]
LF20184_09695
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_09695
Enzymes [BR:
lfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LF20184_09695
DNA replication proteins [BR:
lfm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LF20184_09695
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LF20184_09695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_30
RuvB_N
DNA_pol3_gamma3
AAA_22
AAA_19
AAA_5
TIP49
AAA_assoc_2
AAA_14
AAA_24
AAA_2
AAA_7
Mg_chelatase
nSTAND3
AAA_16
DNA_pol3_delta_C
Sigma54_activ_2
DnaX_C
AAA_18
Glyco_tranf_2_5
DUF815
PIF1
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ATO46994
LinkDB
All DBs
Position
complement(1991908..1993614)
Genome browser
AA seq
568 aa
AA seq
DB search
MAYQALYRVWRPQTFSDVIGQDVITQTLRNAVASNMTSHAYLFSGPRGTGKTSCAKILAK
AVNCLNPQDGEPCNECEICLAANENRLNDVIEIDAASNNGVEEIRDIRDKVKYAPTEAKY
KVYIIDEVHMLSQGAFNALLKTLEEPPANVMFILATTEPQKIPATIISRTQSFNFRRISK
QDILKRMTFILNDKNIKYDEEGLDIIAASAEGGMRDALSILDQALSYGDDELTLKNAQEV
TGALSNEQIVSYMTAIAENKPAQALTSLYQILESGRSALRFTEMIIRVCRNLILYNSNSD
LSKQMDSSVMTKELLAIADKFDNDRLFYIVDQVSATQKNLKNSNQTDIYMEILTVKISEP
KVAKTSASEAEVPVENEVIDKLRDEVSHLQNEVKDLSSGAVVSKNNSKPKPHHRANNNTR
LNKTAIYKVLGSATKNDLAEARDMWPELMSMLSISQRAMMRVAQPVAASSEGIVVAFDYA
MWFEQVQDDSDFLQSLIDNSSRLLKRDCQIVLVPKVDWPKIRKEYIDNNIDSTKKNTVKS
NKETKKTDPTVDEALKLFGDDIVDVKND
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcaagcactttatcgagtttggcgtccccaaactttttctgacgtaattggc
caagatgtcattactcagacgttgagaaatgcggtggctagcaatatgactagtcatgcg
tatttattcagtgggccacgtggtactgggaagacatcctgtgcgaagattttggctaag
gcagttaattgtcttaaccctcaagatggtgagccttgtaatgaatgtgaaatttgttta
gcagccaatgagaaccgtttaaatgatgtgattgagatcgatgcggcctcaaacaatggt
gttgaagagattcgtgacattcgtgacaaagttaaatacgctccaactgaagccaaatat
aaagtttatatcattgatgaagttcatatgctttctcaaggtgcattcaatgccttactg
aaaacattggaagaaccaccagcaaatgttatgtttattttggcaacaaccgaaccacaa
aagattcccgcaacaattatttctagaacacaaagttttaatttcagaagaatctctaaa
caagatatcctgaaacgaatgacttttattttaaatgataaaaatattaagtatgacgaa
gaaggattggacattattgccgcttctgctgaaggtggaatgcgtgatgctttgagtatt
ttggatcaagctttatcgtatggcgatgatgaattgaccctcaagaacgctcaagaagta
accggtgctttgagcaatgaacagattgtttcttacatgaccgcgattgctgaaaacaag
cctgctcaagctttgacgagtttataccaaatcttggagagtggtcgttcggctttacga
tttacagagatgatcattcgagtttgtcgtaatttaattttgtataattccaattctgat
ttatctaagcagatggatagttcagttatgacgaaagaattattggcgattgcggataag
tttgacaatgaccgcttgttttatatcgttgatcaagtcagtgcgacacaaaagaatctc
aagaattccaatcagactgatatttatatggaaattttgacagttaagatttctgaacct
aaggtagctaaaactagtgcttcggaagcagaagtgccagttgaaaatgaagttatcgat
aagttgcgtgatgaagtttctcacttgcaaaatgaagtcaaagacttatctagtggtgca
gtcgtgtcaaagaacaattccaaacctaagccacaccatcgtgccaacaacaatactcgt
ttgaacaagaccgcaatttacaaagttctcggcagcgctactaagaatgatttagccgaa
gctagagacatgtggcccgaactaatgagtatgctttctatttcacaacgtgctatgatg
agagtcgcacaaccagttgctgcatcttcagaaggcatcgtggtcgcttttgattacgct
atgtggtttgaacaagtgcaagatgatagtgacttcttacagtctttgatcgataattct
agcaggttattgaagcgagattgtcaaatagttcttgtacctaaggtcgattggcctaaa
ataagaaaagaatatattgataataatattgattcaactaagaaaaacacggtaaaatct
aataaagaaactaaaaagactgatcccaccgttgatgaagctttaaaattatttggtgac
gatatagttgatgtaaaaaatgactag
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