Companilactobacillus farciminis: LF20184_09780
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Entry
LF20184_09780 CDS
T06098
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lfm
Companilactobacillus farciminis
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_09780
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LF20184_09780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_22
Lon_C
ABC_tran
AAA_16
AAA_30
RecA
AAA
SLFN-g3_helicase
AAA_24
NTPase_1
NPHP3_N
AAA_14
Rad51
AAA_19
KTI12
ABC_ATPase
nSTAND3
DUF7125
AAA_5
RUBY_RBDX
MeaB
Zeta_toxin
ATPase_2
MCM
NACHT
RsgA_GTPase
CbiA
HypA
DUF7129
NB-ARC
DZR
Motif
Other DBs
NCBI-ProteinID:
ATO47613
LinkDB
All DBs
Position
complement(2004962..2006332)
Genome browser
AA seq
456 aa
AA seq
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MAKAKTKFVCQNCGYVSPKYLGRCPNCGVWNQMVEEVDQATVKASATPSRRVSDLESKPV
KIGDVSFEREPRIKTDMDELNRVLGGGIVPGSLILIGGDPGIGKSTLLTQVSGQLQKTGG
KVLYVSGEESASQIKMRADRLGIKGDNLYIYPQTDMSYIRQTIDDMKPDFLIIDSVQTMD
EPEISSAVGSISQIREVTAELMNIAKQQNITVFVVGHVTKGGAIAGPKILEHMVDTVLYF
EGDTHHSYRILRSVKNRFGSTNEIGIFEMRTKGLVEVANPSEIFLEERLANANGSAVVVS
MEGTRPILVEIQSLITPTVFGNAKRTATGLDHNRVSVIMAVLEKRGNLMLQNQDAYLKST
GGVKLDEPAIDLALAMSIASSYKNMGIPGTDCFVGEVGLTGEVRRVNRIDQRVNEAEKLG
FKRIFIPKNNLGDWSKNNKIQIIGVSTVSDAMNKIF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaagctaaaacaaaattcgtatgtcaaaactgtggttacgtctcaccaaaatat
ttagggcgttgtcctaactgtggcgtttggaatcaaatggtcgaagaagtcgatcaagca
actgtcaaagctagtgctacacctagtcgtcgcgtgagtgatttggaatctaaaccagtt
aagattggggatgtctcatttgaaagagaacctcgtatcaagactgatatggacgaacta
aatcgagtactcggtggcggaatcgtgccagggtctttgattttaattggtggagatcca
ggaattggtaagtcaacgcttttgacccaagtttcgggacaacttcaaaagaccggtggc
aaagttttgtacgtttctggcgaagagagtgcttctcaaattaagatgcgtgctgaccgt
ttaggtatcaaaggcgacaacttatacatttatccacaaacggatatgagttatattcgt
caaacaatcgatgatatgaaaccagactttttgattatcgattctgtgcagacgatggat
gagccagagatttcttcagcggtcggtagtatttcgcagattcgtgaagtaacggctgaa
ttgatgaacatcgctaaacagcaaaatattaccgtctttgtcgttgggcatgtgactaaa
ggtggcgctatcgcaggaccaaagattttggaacacatggtggacacggttttgtatttt
gaaggtgacactcatcacagttatcgaattttacgttcagtcaaaaaccgtttcggttcg
actaacgaaatcggtatttttgagatgcggaccaaaggactagttgaagtggctaatcct
tcagaaatctttttagaagagcgtttagctaatgccaatggttctgcagtggtagtttca
atggaaggaacgagaccaattttggttgaaattcaatccttgatcacaccaactgttttt
gggaacgccaagagaacagcaaccggattagatcataatcgagtttccgttatcatggcg
gtactagaaaaacgtggtaatttgatgctccaaaatcaggatgcttatttgaaatctact
ggtggcgtaaaattagatgagccggcaatcgatttagctttggcgatgtcaattgcttct
agctataagaatatgggtatccctggaactgactgtttcgttggtgaagttggtttgact
ggtgaagtaagacgagtcaatcgaatcgatcaacgagtcaatgaagctgagaaattaggt
ttcaagcgaatctttattcctaagaacaatcttggcgactggtccaaaaataataagatt
caaatcatcggtgtcagtaccgtgtcagacgctatgaacaaaatattctaa
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