Companilactobacillus farciminis: LF20184_10510
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Entry
LF20184_10510 CDS
T06098
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lfm
Companilactobacillus farciminis
Pathway
lfm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LF20184_10510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfm03021
]
LF20184_10510
03400 DNA repair and recombination proteins [BR:
lfm03400
]
LF20184_10510
Transcription machinery [BR:
lfm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LF20184_10510
DNA repair and recombination proteins [BR:
lfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LF20184_10510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
ATO47147
LinkDB
All DBs
Position
complement(2147118..2147756)
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AA seq
212 aa
AA seq
DB search
MKFDKFKDQNKDELSLIEVAYEILNNNNKEVMNFSDIVNEMQDYLGKSDDDIKRALPQFY
TDLNNDGSFLSLGENVWGLRKWYPYDSVDEEVNHPEDNGTENTHKAAQKVNAFLSEDDDD
DDVVDYDDDSDLNVSDMDDDDDSDGSSSNGPDLSKFTNSDLTSVDDDDDDEHDDSLEDGI
EGQLSEFDADDDDEDIDLSDQDDDDDEDDDEE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtttgataaattcaaggatcaaaataaagacgagctctcattgattgaggttgcc
tatgagattctcaacaacaataataaagaagtaatgaatttctcagatatcgttaacgaa
atgcaagactatttaggtaagtctgacgatgatatcaagagagcacttccacaattctat
acagatttgaataatgatggaagttttctttcactcggcgaaaatgtttggggtctacgt
aagtggtatccatatgattcagtcgacgaagaagtaaatcaccctgaggataatggtact
gaaaatactcataaagctgctcaaaaggttaatgccttcttgagtgaagatgatgacgac
gatgatgttgtcgattatgatgatgacagtgacctaaatgtatctgatatggatgacgac
gatgacagtgatggctcatcaagcaatggcccagacttgtctaagttcactaattcagat
ttgacatcagttgatgacgacgatgacgatgaacatgatgattcattagaagacggtatc
gaaggacaattatcagagtttgatgctgatgacgacgacgaagatatcgacttgtctgac
caagatgatgacgatgatgaagatgacgacgaagaatag
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