Companilactobacillus farciminis: LF20184_12090
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Entry
LF20184_12090 CDS
T06098
Name
(GenBank) hypothetical protein
KO
K03492
GntR family transcriptional regulator, regulator of glucomannan utilization
Organism
lfm
Companilactobacillus farciminis
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lfm03000
]
LF20184_12090
Transcription factors [BR:
lfm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
LF20184_12090
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_11
HTH_36
TrmB
MarR
RPA_C
HTH_Crp_2
DUF3996
Rrf2
HTH_23
HTH_24
Fe_dep_repress
HTH_41
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
ATO47445
LinkDB
All DBs
Position
complement(2475934..2476629)
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AA seq
231 aa
AA seq
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MKETPKYVIVANRLRQQILEKEYKINEQLPQETAIAKTLNVSRITVRKALDILVNEGLIY
RIQGSGTFVKDNHPGERNEVRRSVEIFDFNKYQVRLINFGVSKPSPVVMNQMNINQFDLT
YEVERLIMDGDRIIALQNIFMPVKIIQGMQMNSLMGSIYDFIEKDLGFTIDSAIRTISSE
ISNEETSGLLDLPKPEPLLTVEQRSFLDNGQIFEYAYTYIRSSQFSIHEAI
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagacgcccaaatatgtgattgtggcgaatcgtttaagacaacaaatactggaa
aaagaatacaaaataaatgagcaattaccgcaagaaactgcaattgctaaaactttgaat
gttagtcgaattacggttagaaaagcactagatatattagttaatgaaggtttaatctat
agaattcaaggatcaggtacctttgtaaaagataaccatcctggagaaagaaacgaagta
agacgttcggtagaaatttttgattttaataagtatcaagtaaggctgataaattttggc
gttagtaagcccagtccagtggtaatgaatcaaatgaatattaatcaatttgatttaacc
tatgaagtagaacgtttgattatggatggagatagaataattgctctgcagaatattttt
atgccagtcaagattattcaaggtatgcaaatgaactctttaatgggatcaatttatgat
tttattgaaaaagatttgggtttcacaattgatagcgcaattagaacgatttcttcggaa
atatctaatgaggaaacttctggattgttggatttaccaaaaccagagccattattaaca
gttgaacaacgttcatttttagataatggtcaaatttttgagtatgcgtatacttatatt
cggtcgtcacagttttcaatacacgaagcaatttga
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