Limosilactobacillus frumenti: LF145_03255
Help
Entry
LF145_03255 CDS
T06870
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lfn
Limosilactobacillus frumenti
Pathway
lfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LF145_03255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfn03400
]
LF145_03255
Enzymes [BR:
lfn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LF145_03255
DNA repair and recombination proteins [BR:
lfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LF145_03255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
AAA_7
nSTAND3
AAA_22
AAA
RsgA_GTPase
DEAD
Zeta_toxin
TsaE
NPHP3_N
HTH_IclR
AAA_29
AAA_16
AAA_25
AAA_12
AAA_28
HHH_5
Corona_NS2A
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QFG72413
LinkDB
All DBs
Position
676639..679146
Genome browser
AA seq
835 aa
AA seq
DB search
MADEISLFDVPHEPSFFIGQVQSDIFDSPDSFYKVLIVSVEDNNFDWTENEITVTGSFGD
LRDDQTYRFEGKLVDHPKYGQQFQASSYHVNQPSSRDGVISFLSGKQFPGVGEKTATKIV
DALGNDAINKINNDHTVLNSLNLRPAIRQSIIANLTANQGMDQIVIGLNDLGFGSNLAST
IFERYGEETLDVISKNPYQLAHDIDGISFQRADQVAAHFDIQADDPRRVDAAIVQALDDL
TMMSGDTYTSAPPLLRQCQTLLSQNRSRAVQTDLISERIVALGKKGDIQYENQRIYPRAL
FDAEFQIANQLNRLMNNSDQSDQQSEIGSVLAKLSTQTGIKYDQHQQEAIKTALRSKLML
LTGGPGTGKTTIIKGIVAGFADMHQLSLDPKEYKEKAFPILLAAPTGRAAKRMSEATDLP
ASTIHRLLGLNGRESPNELNAKELTGSLLIVDEMSMVDTLLFKVLVQSIPDTMHVVLVGD
KDQLPSVGAGQVFHDLLAFDHLPKVELTQIHRQSADSTIISLAHAIKNGRIPSDLTSREA
DRSFISCRASQVPNAVEQIIKMALKKGYSADDLQILAPMYRGQAGVNHLNELAQQVYNPA
TSDKTEVEFRGQVFRVGDKVLQLVNSPENNVFNGDIGKITMIEQTKNHKRTTMTIDFDGN
EVTYGRMDWNQIRLAYAISIHKAQGSQFKMVVLPLVHEFGRMLQRNLLYTAVTRASSKLV
LLGEPQAYLTCINNQSINRHTTLLQRLQSVWGETVNDQSGDGLLTNDNRELSPAHKNNSQ
ETNENQQGETISKTATISGDTHILTAELIRTGAIDPMIGMDGIRPEHSAKSLRLS
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaaattagtttattcgacgtgccacatgagccgtctttttttattggtcaa
gttcagtctgatatttttgacagtcctgattccttttacaaggtcttgattgtgtctgtt
gaagataacaatttcgactggacggagaatgaaataacggtgacgggatcttttggcgac
cttcgtgatgatcaaacctaccgctttgaagggaaactggtcgatcatccaaaatatggt
caacagttccaggcttcttcttatcatgtcaaccagcctagtagtcgggatggggtgatt
agctttctgagtgggaagcaatttcctggcgttggagaaaagaccgcgactaagattgtt
gatgctttgggtaatgatgccattaataagattaataatgatcatacggtccttaactcg
ttaaatttacggccagctattaggcaatctattattgccaaccttacggccaaccagggc
atggatcagatcgtcatcgggttaaatgatctgggctttggtagtaatctggcatccaca
atttttgaacgctatggggaagaaacacttgatgtgattagcaaaaatccttaccagttg
gctcatgacattgatggtattagcttccaacgtgccgatcaggttgctgctcattttgat
attcaagctgatgatccgcgacgggtagatgccgcaattgtccaggcactggatgatctc
accatgatgagtggggatacatatacgagtgctccaccgttattgagacaatgtcagact
ttactttcccagaatcgttctcgggctgttcagacagacctgatatccgagcggattgtc
gcgctgggcaagaagggtgatattcagtatgaaaaccaacggatatacccccgtgcacta
tttgatgctgagtttcaaattgccaatcaacttaatcgcttgatgaataacagtgatcag
agtgaccaacagtccgaaattggctctgttctggccaaactttctactcaaacaggaatt
aaatatgatcaacatcaacaggaagcaataaaaaccgctttgcgatcaaaactaatgtta
ttgactggtggccctggaacagggaaaacgaccattattaaggggatcgttgccggattt
gctgatatgcaccaactatcattggatcccaaagaatacaaggagaaggccttcccgatc
ttgctggcagcaccaactggccgtgctgctaaacgaatgagtgaagcaacggatttgcca
gcaagtactattcaccgcctactagggctcaatggccgggaaagtcctaatgaactaaac
gccaaagaattgaccgggtcattgttgattgtcgatgaaatgtcgatggtggacacgctc
ttgtttaaggttcttgtccagtccattccggatacaatgcacgttgtcttggttggcgat
aaggaccaattaccatctgtaggggccggtcaggtcttccatgacctgttagcatttgat
cacttgccaaaggtcgaacttactcaaattcaccggcaatcggcagattcaacgattatt
tccttagctcatgctattaagaatggccggatcccatcagatctaacgagccgggaggca
gacaggtcgtttatctcatgtcgcgctagtcaagtaccgaatgctgttgaacaaatcatt
aaaatggcgctaaagaaaggttattctgcggatgatttgcagattctggcaccaatgtat
cgtggtcaggcgggcgtcaatcatttaaatgaacttgctcagcaggtttataatcccgct
acctcagacaagacagaagtcgagtttcgaggacaagtctttcgcgtgggtgataaggtg
ctgcaattagttaatagccctgaaaataatgtgttcaacggtgatattggtaaaatcaca
atgattgagcagactaagaaccataagcggaccactatgacaattgatttcgatggtaat
gaagttacttatgggcggatggattggaaccaaattaggttggcatatgcaatttccatt
cacaaggctcaaggtagtcagtttaagatggttgttttaccattggttcatgaatttggc
cggatgttacaacgcaaccttttgtatacggctgttacgcgggcttcatcgaaattagta
ttattaggggaaccgcaagcttatcttacttgtattaacaatcaatccataaatcgtcat
acgaccctgcttcaacggttgcaatctgtttggggagaaacagttaatgaccagtcggga
gacggtttactaactaacgataatcgtgaattatcaccagcacataaaaacaattcacag
gaaacaaatgaaaaccaacaaggagaaaccatctccaagacggcaacaatcagtggagat
acacatattctcactgcggagctgatcaggacgggggccattgatccaatgattgggatg
gatggcattcgtccagaacattcagcgaagagcttgcgcctttcataa
DBGET
integrated database retrieval system
