Limosilactobacillus frumenti: LF145_03440
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Entry
LF145_03440 CDS
T06870
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lfn
Limosilactobacillus frumenti
Brite
KEGG Orthology (KO) [BR:
lfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfn03016
]
LF145_03440 (rnz)
Enzymes [BR:
lfn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LF145_03440 (rnz)
Transfer RNA biogenesis [BR:
lfn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LF145_03440 (rnz)
Prokaryotic type
LF145_03440 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QFG72447
LinkDB
All DBs
Position
715478..716407
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AA seq
309 aa
AA seq
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MQLEFLGTGAGSPSKQRNVTSVALRLLEELNEVWLFDAGEATQHQILRTTIRPRKISKIF
ITHLHGDHIFGLPGLLSSRSFQGGNEPLTIYGPVGIKRFVLTALQVSESRLSYPLHFVEI
DHDQVLFDQNGFKVTTMHLDHKIACYGYRIEEADHPGELLVDKLKADHVPSGPLYGQLKA
GKTVTLPDGRTIDGHDYIGHPQPGRIVAIMGDTRKTKNAIILAQNADVLVHESTFAKNEA
QMARSYYHSTSQQAAEVAKAAHVKRLLLTHISARYTGKAAYQLAYQVRDILPNTRVVNDF
DVIDIPFNK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcaactagagtttttaggtactggcgccggctcacccagtaagcagcgtaatgttaca
agtgtcgctcttcgtctactggaagaattgaatgaagtttggttgttcgacgctggggaa
gctacccaacaccaaatcttacggacgacaatccgtcctcgtaaaattagcaaaatattt
attactcacttgcatggtgatcatatcttcgggttaccaggcttattaagttcccgttct
tttcaaggcggtaatgaaccgcttaccatctatggaccagtggggatcaagcggtttgtt
ttgactgctttacaggttagtgaatcgcgtttgagttatcccttacatttcgtcgaaatt
gaccatgaccaggttctttttgatcagaatggctttaaggtgacgacgatgcatctagat
cataagattgcctgctatggttaccggattgaagaagctgaccatcccggtgaattacta
gttgataagctgaaagcagatcatgtaccatcaggaccactctacggacaacttaaggct
ggtaagaccgttactttgcctgatggtcgtaccattgatggccatgattatataggtcac
ccacaaccagggcgaattgttgcaattatgggtgatacgcgcaagactaagaatgcaatc
atcttggcacaaaatgctgatgttttagttcatgaaagtacctttgccaaaaatgaggcg
cagatggcgcggagctattatcactccactagtcaacaggcggcagaagttgctaaggct
gcccatgttaagcgattactattgacccatatttccgcgcgctacactgggaaagctgct
taccagctggcctaccaagtacgtgatattctgccaaatacgcgggtagtaaatgatttc
gatgtaatcgatattcctttcaacaagtag
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