Limosilactobacillus frumenti: LF145_03815
Help
Entry
LF145_03815 CDS
T06870
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lfn
Limosilactobacillus frumenti
Pathway
lfn03030
DNA replication
lfn03430
Mismatch repair
lfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LF145_03815 (dnaE)
03430 Mismatch repair
LF145_03815 (dnaE)
03440 Homologous recombination
LF145_03815 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfn03032
]
LF145_03815 (dnaE)
03400 DNA repair and recombination proteins [BR:
lfn03400
]
LF145_03815 (dnaE)
Enzymes [BR:
lfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LF145_03815 (dnaE)
DNA replication proteins [BR:
lfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LF145_03815 (dnaE)
DNA repair and recombination proteins [BR:
lfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LF145_03815 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QFG72518
LinkDB
All DBs
Position
791547..794903
Genome browser
AA seq
1118 aa
AA seq
DB search
MVFVPLQVHSSFSLLQSPIRIKQLVQQAKQLGYSSLALTDRNILYGAVDFYNAAHEAGIK
PLIGLELTVALNNVDGTTLDIVLLAKDRKGYQHLMDLSTLHQTTDYQKLPLTLQNIVPHL
ASLIVMIPPQTSVYSWLKDDVTTLMTLKNAVDDHSLYLGINPQLDLVQRETLQQLSTKTR
LALVGLNSVDYLKPTDLFASKVLRAIGQNVTLDNPAQSARQEGTHYLRSMSEVEADYRTA
HLLPAAERTGQIADACSLDFEFKAPVLPHFATPDGLSSQQYLRQLCIKGLKKRQVAPGLT
IKDYQQRLTKELKVIHQMGFDDYFLIVWDVMNFAHSTNITTDPGRGSAAGSLVAYALAIT
EVDPLQYRLLFERFLNPERAQMPDIDLDIPDNRRNEVLQYVHQKYGHQRVAQIITFGTLA
AKQVIRDVSRVFGLTRYQVNELTGALPHGLHLTIDSALKESQPFRNLLDDHPEYRLLIQV
AQQLEGLPRHYSTHAAGIVLSEKPLSDIVPLQEGSDGLLMTQFPKDTVEALGLLKMDFLG
LKNLSILDAAVQSIRNTSPDFDLTKISLSDPTTMQLFQKGDTDGVFQFESAGIRQVLVSL
HPDSFEDIVAVNALYRPGPLENIPHFIARKHGQEAITIPDPSLKPILGSTYGILVYQEQV
MQVASAMAGFSLGEADLLRRAMSKKKRHTMESMRNKFITGAQQRGYSKELAQQVFDYIDQ
FANYGFNRSHAVAYSKLAFEMAYLKCHYPAEFFAALMNAETNMAKMKQHVSDAQRFNVAV
SGPRINISDRSFTLNQGTIYFGLGAIKGMRRDFIATIIDERRLHGKYKDLRNFIDRLPSK
WQKEELISPLIYTGAFDGLGYNRAEMIDSLDQLISGIKLFAGTEGLESDPSLQSSIKQRA
EYPLITRLTKENDYLGVYLSGHPVSQFAELATRLHAVKIASLPLNRPVTVLILVNRVKVI
HTKKDHRQMAFITGSDQTGSVNVTVFPRQYDRFAELLKPNTVLVVRGKTEERSGHGLQIV
ADNIDNAQQMQHRTQPNIQRWVLRVTDESKKEVLLTQLHQLTRGHHGNTPVLIYYPQTDM
KYLEAARYWLNTSEEVHHTLNRIFGADNVVLQQLHKKH
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgtaccgctacaagttcatagttcatttagcttgctgcagagcccaattcgt
atcaagcaacttgttcagcaggcaaaacagctgggatactctagcctagccttaactgat
cgaaacattttatatggtgcagtcgatttttacaatgccgctcatgaggcgggcatcaag
ccgttgattggtcttgaattaaccgttgctttgaacaatgttgatggaacaaccttagat
attgttttgcttgctaaggatcgtaaagggtatcagcacttaatggacttgtccacgctt
caccagacaactgattaccagaaattgccgttaaccttgcaaaatattgtgccccattta
gcgtcactaattgtcatgattccaccgcaaacgagtgtttattcatggcttaaggatgat
gtaacaactttgatgacattgaaaaatgctgttgatgaccacagcttatacttaggaatc
aatccgcaactagacctggtccaacgggagaccttacaacaactcagtacgaaaacgcgg
ttagcattagtagggctgaattcggtggactacttaaaaccaacagacttgtttgccagt
aaggtcctcagagcaatcggtcaaaacgttaccttggataatccagcccagtctgctcgt
caagaaggcacccattatcttcggagcatgtctgaagttgaggcagattatcgaaccgca
cacttgttgccggcagccgagaggacgggacaaattgcagatgcctgctcactagacttt
gaatttaaagcaccggtgttaccacattttgcgaccccagacgggcttagttctcaacaa
tatttgcggcagctttgtattaagggattaaaaaagcgtcaggttgccccgggtttgacc
atcaaggattaccaacaacgattgacgaaggaacttaaggtgatccaccagatggggttt
gatgattatttcttgattgtttgggatgtcatgaattttgcccactcaaccaatatcact
actgacccaggtcgggggtctgcagctggctcgttagtcgcctatgcattagcgattacc
gaagttgacccgttacaataccggcttctctttgaacgatttttaaaccctgaacgagcg
caaatgccagatattgaccttgatattcctgataatcgccggaatgaggttttacaatat
gttcaccaaaaatatggccaccaacgtgttgcccaaattatcacgtttggtaccctagct
gctaaacaagtgattcgggacgtgagtcgggtttttggattaacgcgctaccaagttaat
gagttaacaggagccctcccacatggccttcacctaactattgactcggcattaaaggaa
tcgcaaccattccgtaatttattggatgaccatccagaataccggttgttaattcaagtt
gctcagcaactagaaggattaccgcggcattattcgactcacgccgctggaattgtatta
tcggaaaaaccactatcagacatcgtgccactccaagagggtagtgatggcttattgatg
acccagttcccaaaggataccgttgaggcgctgggactgttgaagatggactttttgggg
ttgaagaacctctcaattttggatgcagctgtccagtccatccgtaacacttctccagat
tttgatttgaccaaaatctctttgagcgaccccacaacaatgcagttgttccaaaagggc
gatacagacggggtctttcagtttgaatcagcgggaattcgtcaagtgttagtcagtttg
cacccagattcatttgaagatattgtggccgttaacgctctttatcgtccaggtccgctg
gaaaatattccccactttattgctcgcaaacatggtcaggaagcaatcactattcctgat
ccatctctaaaacccatcctgggttcaacctatggcattttggtgtaccaggaacaagta
atgcaggtggcatcagcaatggctggtttctcattaggggaagccgatttgttacggcgg
gccatgagtaaaaagaagcgtcataccatggaaagcatgcggaacaaatttattactggt
gctcagcaacgggggtatagcaaagaattagctcaacaagtattcgattatattgatcaa
tttgctaactatggttttaatcgctctcacgcggttgcgtattccaaattagcttttgaa
atggcatatctgaagtgtcactatccggcagaattttttgctgcactgatgaatgcggaa
actaacatggctaaaatgaaacagcatgttagtgatgctcaacggtttaatgttgctgtt
tcagggccgcggattaacattagtgatcgttcgtttaccctcaatcagggaaccatttat
tttggcctaggtgcaattaaggggatgcggcgcgactttattgcgacgattattgatgaa
cgacgccttcatggtaaatataaagatttacgtaactttattgaccgtttaccgagtaag
tggcaaaaagaagaactgattagtccattaatttacacgggggccttcgatggtcttggc
tataatcgtgcagaaatgattgattcacttgaccagttgatttcgggcattaagttattt
gcagggacagaaggacttgagagtgatcccagtctccagtccagtattaaacaacgcgcg
gagtatccattaattacgcgattgacaaaggagaatgattatctaggtgtttatttatcg
ggtcacccggttagtcaatttgccgagttggcgacccgcttgcatgctgttaagattgca
tcattaccacttaatcgccccgtcaccgtgttaattttggttaaccgagtgaaggtaatc
cacactaagaaagatcatcgacaaatggcatttattacggggtctgatcaaacgggttca
gtcaatgtgacggttttcccgcggcaatatgatcggtttgctgaattactgaaacccaat
acggttttggtagttcgggggaaaaccgaagagcgctccggacacggtttacaaattgtc
gccgacaatattgataatgctcagcaaatgcagcaccgaactcagccgaatattcaacgg
tgggtattgagagttacagatgagagtaagaaggaagtattgcttactcagctccaccag
ttaactcgtggtcatcatggaaatacaccggttttaatttattatccgcaaacagacatg
aagtatttagaagctgctcggtactggcttaatacaagtgaagaggttcatcacacactc
aaccggatatttggagcagataatgttgtcttacaacagctccataagaagcattaa
DBGET
integrated database retrieval system
