Limosilactobacillus frumenti: LF145_05675
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Entry
LF145_05675 CDS
T06870
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lfn
Limosilactobacillus frumenti
Pathway
lfn03030
DNA replication
lfn03410
Base excision repair
lfn03420
Nucleotide excision repair
lfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LF145_05675 (polA)
03410 Base excision repair
LF145_05675 (polA)
03420 Nucleotide excision repair
LF145_05675 (polA)
03440 Homologous recombination
LF145_05675 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfn03032
]
LF145_05675 (polA)
03400 DNA repair and recombination proteins [BR:
lfn03400
]
LF145_05675 (polA)
Enzymes [BR:
lfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LF145_05675 (polA)
DNA replication proteins [BR:
lfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LF145_05675 (polA)
DNA repair and recombination proteins [BR:
lfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LF145_05675 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF145_05675 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QFG72852
LinkDB
All DBs
Position
complement(1147855..1150515)
Genome browser
AA seq
886 aa
AA seq
DB search
MAKHLLLIDGNSIVFRAFFAMHSQIDKFTNQDGLHTAAIYGFKLMLDHVLDSFHPDAALV
AFDAGKVTFRTKMYGDYKGGRNKTPEELTEQLPYVRELVQKSGLHSYELPNYEADDIIGT
LAKQADDAGYETLIVTGDRDLTQLASDHTTVAVTHKGVTETEHYTPAHVEEKLGITPTQI
IDMKALMGDSSDNYPGVTKVGEKTAIKLVKQFGSVEGLYDHINELKKSKMKEHLVDEEDI
ARQCKTLATILRDAPVKIGLQDLSYQGPQTEELIEFYREMDFKSFLKKMNINPDDDEEHL
STIKYVQLSKDNLDQLKQLTGEVSFYLEMPEANYHLSPFAGFVIGDGQHWFVSRETELLN
QQPLKHILESTEIKKNVFNAKAQIVGLHRLGVDFRNVDFDLLLASYLLNTNDNSNDLGNV
AREHGFNDVQTDEAVYGKGAKRTIPDDDQVFFDHLVHKAHAIDHLRVSLFKQLDENEQRP
LYTDIELPLTRVLAEMEMTGVHVDAQTLKNMGSKLKERMAEIEAQIYEEAGEKFNINSTK
QLGHILFEKLKLPVIKKTKTGYSTAVDVLEKLAPQAEIVEQILQYRQISKLQSTYITGLL
KVIHSSDQKIHTRYLQTLTQTGRLSSVDPNLQNIPVRLPEGRQIRRAFVPSHEGWQIFSS
DYSQVELRVLAHITGDKNLQTDFKNGEDIHAATARRIFHLQPDQKIDPNMRRRAKAVNFG
IVYGISDYGLAQRIHVSRKDAHEFIQNYFKEFPNVKKYIHDTVDFAREHGYVETITHRRR
YLPDINAKNFSRRSFAERTAMNTPIQGSAADIIKIAMIRMQDELQKHHLQAKMLLQIHDE
LVFEAPAEEIPVLQKLVPSVMDSAVKLDVPLKVESKFGDTWYDLKK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcatttacttttaattgatggaaacagcattgtttttcgagcattttttgca
atgcatagtcaaattgataaatttaccaaccaggatggtctgcacactgcagcaatttat
ggctttaagctgatgctggatcatgtgctggactcgttccatccagatgcagcattagtg
gcgtttgatgcgggtaaagtgacgttccgaacgaaaatgtatggtgattataagggtggt
cgtaataaaactcctgaggaattaaccgaacagttgccatatgtccgggaactagtacaa
aagagcggtttacatagttatgagcttcctaattatgaggccgatgacattattgggacg
ttggccaagcaagccgatgatgctggctatgaaaccttaattgttactggtgaccgtgac
ttaactcagctcgcaagtgatcatacaacagtggcggttactcataagggagtcactgaa
actgaacactatactcctgcccacgttgaggaaaaactaggtataacccccacacagatt
attgatatgaaggcgcttatgggtgatagttctgataactatccgggagtcactaaagtc
ggtgagaagacggccattaaacttgttaagcaatttggctccgtcgaaggtttgtatgac
catatcaacgagttaaagaagagcaagatgaaggaacacttggtagatgaagaagatatt
gcccgtcaatgcaagacccttgcgacgattttgcgcgatgccccagtcaaaattggcttg
caagacttatcatatcagggcccacagaccgaggaattgatcgaattttaccgggaaatg
gacttcaaatctttcttgaaaaagatgaatattaatcccgatgatgatgaagaacacctg
agcactattaagtatgtgcaactaagtaaggataaccttgatcagttgaaacagctgacg
ggggaagtgagcttctaccttgaaatgccggaagctaattaccacctttcaccatttgcc
ggttttgttattggtgacggtcagcattggtttgttagccgggaaactgaattactgaat
cagcaacctcttaagcacattttggaaagtacggagattaaaaagaatgtctttaatgcg
aaggctcagattgtgggcttacatcgtctcggtgttgatttccgcaatgttgactttgac
ttgttgctggcatcatatttgttaaataccaatgacaatagcaatgacttgggtaacgtt
gctcgggaacacggcttcaatgacgtccaaactgatgaagcagtgtacggaaagggtgct
aaacgcacaattcctgatgatgaccaggtcttcttcgaccacttagttcataaggcccac
gctatcgatcacctgcgagtaagtctgtttaagcagttagatgaaaacgaacagcggccc
ctctacactgatattgaattgccattgacccgtgttttggcagagatggaaatgaccggg
gttcatgttgatgcccaaacactcaagaacatgggtagcaaactgaaggaacggatggcc
gaaattgaggcccaaatatacgaagaagcaggtgagaagtttaatattaattccaccaaa
caattaggccatattctgtttgaaaaactgaagttaccagttatcaagaaaactaagacg
ggctattcaacggccgttgatgttttagagaaattggctccccaggcggagattgtcgaa
caaattcttcaatatcggcagatctcaaagctccaatcaacgtatattactggcttgctc
aaggtgatccattccagtgaccagaagattcatacacggtacttacagaccttgacccag
actggtcggttatcgtcagttgatccgaacctccagaacattccggttcgtctgccagaa
ggtcggcaaattcggcgtgcctttgtaccaagtcatgagggctggcagatcttttcttcc
gattattcccaagtggaactacgtgtgttagcccatatcactggtgataagaatctccaa
accgacttcaagaacggtgaagatattcatgccgcaactgcacggcggattttccacctg
cagccagatcagaaaatcgatccgaacatgcggcggcgtgccaaggccgttaactttgga
attgtttatggaattagtgactatgggttagcacaacggattcacgtcagtcgtaaggat
gcccatgagttcattcaaaactacttcaaagaatttccaaacgttaagaagtatattcat
gacacggttgattttgcccgcgaacacggttatgttgaaacaatcactcaccgtcgtcgt
tacctacctgacattaatgccaagaacttcagccgtcgttcatttgcagaacgaactgca
atgaatacgccaatccaagggagtgcggctgatattattaagattgccatgattcggatg
caggatgaattgcaaaagcatcatcttcaagccaagatgttactgcagattcatgatgaa
ttagtgttcgaggctcctgctgaagaaatcccagtgctccagaagctcgtgccgtcagta
atggattccgcagttaagttggacgtgccactgaaggtggaaagcaagtttggtgacact
tggtatgacctcaagaagtaa
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