Limosilactobacillus frumenti: LF145_07575
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Entry
LF145_07575 CDS
T06870
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lfn
Limosilactobacillus frumenti
Pathway
lfn03420
Nucleotide excision repair
lfn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF145_07575
03430 Mismatch repair
LF145_07575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfn03400
]
LF145_07575
Enzymes [BR:
lfn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LF145_07575
DNA repair and recombination proteins [BR:
lfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF145_07575
MMR (mismatch excision repair)
Other MMR factors
LF145_07575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD_C
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
SLFN-g3_helicase
Catalase_C
DEAD
NACHT
AAA_16
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QFG73176
LinkDB
All DBs
Position
complement(1517969..1520269)
Genome browser
AA seq
766 aa
AA seq
DB search
MVEQSEQQFEQAHLDHVIDEVKKAETSAEGKIKTAKRDIKGINKQIDDIHLNTTTYSGMM
DTAMSFRTQQQMLDERHNSWQHAADHLSTLRRLEKKPFFARIDFQEKGSDHPETIYIGLA
SFSDRPDHFLVYDWRAPISSIYYEGKLGKVSYDTPVGKQEANLTLKRQFQIEDGTIVTIF
DTDEQVGDQMLLSALGNHSSTKMKSIVTTIQRTQNEIIRDTKDDLLFVQGAAGSGKTAAV
LQRVAWLLYRYRGNLTSSQVVLFSPNQLFNDYIDQVLPELGEHNMVQMTYFQFANRRVPR
LHVQTLGQRFESSQDPMMKKAVRLTTSLDYFKATGRYAQHLGKAHLRFRNIMFRKKVLFS
KEKIKEIYYSFNQNYNLGNRLDGTKEALIKALNHRISVEMRSKWVEEDVQSLSKEQIDDM
MGDQPREFENEDQQFRFLARQIVMEALTPVKRAIDHNLWININGQFIHLLRVTPKLLDLS
KFGLTEADWTAFVDQTKEELRHGQISASGITIYLYLYDLITGRKGQRDIRYVFIDEVQDY
DAYQLAYLKFRFPFARFTLLGDLNQAIFTHENSRSLLQQLTTMFDPDKTKVVQLTKSYRS
TKQITNFTKHLLMNGEQIEAFDRNGDLPTVIVDRNYQHGVDSLVKTLRTDQQQHDAVAII
GKDLAECEQLASALKRRNVKATLIRTENQRLVDGVIIVPSYLAKGLEFDAVIVWNCNATQ
YPDDAERQLLYTIASRAMHLLTLISVGQPTPLLKGVPTDEYQLIEN
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
ttggtagaacaatcggaacaacaatttgaacaagcccacttggatcacgttattgatgag
gtcaaaaaagcagaaacctctgcggaaggcaaaatcaagactgccaaacgtgatatcaag
gggattaataagcagattgacgatattcatctgaacacgacgacttattcagggatgatg
gatactgccatgtccttccgtactcagcagcagatgctggatgaacggcacaatagttgg
caacacgccgcagatcacctatcaactttgcggcgattagagaagaagcccttctttgca
cggattgactttcaggaaaaagggagcgatcatccggaaactatctatattggactagct
tccttttcagaccgtcctgaccactttctggtttacgattggcgggcaccaatttcctct
atttattatgaaggaaaattgggcaaagtttcttatgatacgccagttggcaaacaggaa
gctaatttaaccttaaaacgacaatttcaaatcgaggacgggacgattgttactatcttt
gatactgatgaacaagttggtgaccagatgctcttgtcagcattgggcaaccattccagt
accaagatgaagagtatcgttactaccattcaacgaacgcagaatgaaattattcgggac
actaaagatgacttgctatttgtgcagggggctgctggttccgggaaaaccgcagccgtc
ttgcaacgggtggcctggttactgtaccgctaccggggtaatctgacttcttcacaagtg
gtcctattctcgcctaatcaattattcaacgactacatcgatcaagtgttgcccgaattg
ggtgaacataatatggttcaaatgacctacttccagtttgctaatcgccgggtaccacgg
ctccatgtccaaaccctcggccaacgctttgaaagtagtcaggatccaatgatgaaaaaa
gcggttcgcctgaccaccagtctggattactttaaggcgacgggacgttacgctcagcat
ctggggaaggcccaccttcgtttccgtaacattatgttccgcaaaaaagtcctctttagt
aaagagaaaatcaaggagatctattattctttcaatcagaactataacctgggaaatcgg
ctagacggaaccaaggaagccctcatcaaggctttgaaccaccggattagcgtggaaatg
cggagtaagtgggttgaagaagatgttcaatccttgagtaaggaacagattgacgatatg
atgggcgatcagcctcgggaatttgaaaatgaagaccagcaattccgcttcttggcccgg
caaattgtgatggaagccctgacaccagtaaagcgggccattgatcataacttatggatc
aatattaacggtcagtttattcacttactacgggttactcctaagttgcttgatttaagt
aaatttggactcacggaagctgactggacagcatttgttgatcagactaaggaagaactg
cgccacggtcaaattagtgctagcggtattactatttacttgtacctatatgacttaatc
accggccgcaaagggcagcgggatatccgctacgtctttattgatgaagtccaggattat
gatgcttaccaattagcatacctgaagttccgcttcccatttgctcggtttacattatta
ggagacctcaaccaagccatctttacccatgagaacagtcgatcactattgcaacaactg
acgaccatgtttgatccagataaaacgaaggtggttcaattaacgaagtcgtaccggtct
actaaacaaatcactaactttaccaagcatttattaatgaatggtgaacagattgaggct
tttgaccggaacggtgatttgccgacggtaattgtggatcgaaattatcagcatggcgtt
gattctctagtgaagacattgcggactgaccaacagcagcacgatgccgttgccattatt
ggtaaggacttggctgagtgtgagcagttagcatcggcacttaagcggcgtaatgttaag
gccactttgatccgtaccgaaaaccaacggctggttgatggggtgattatcgtaccatct
tacctggccaaggggttggaattcgatgccgtgattgtctggaactgtaacgcaacacaa
tacccagacgatgcagaacggcagctcttgtacacgattgcatctcgagcaatgcacctg
ttgacattaatttcagtcgggcaaccaacgcccttattaaagggtgtccctactgatgag
tatcaattaattgaaaactaa
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