Lactococcus formosensis: LMK00_00015
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Entry
LMK00_00015 CDS
T08654
Symbol
rexB
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lfo
Lactococcus formosensis
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfo03400
]
LMK00_00015 (rexB)
Enzymes [BR:
lfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMK00_00015 (rexB)
DNA repair and recombination proteins [BR:
lfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LMK00_00015 (rexB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
Dna2
Motif
Other DBs
NCBI-ProteinID:
USJ20417
UniProt:
A0A9Q8Y1P2
LinkDB
All DBs
Position
2710..6033
Genome browser
AA seq
1107 aa
AA seq
DB search
MEIIYTEITQDLTQFLLERAQQALKEEKKVYYIVPSSMSFEKEKEILERISLGADTAVFD
LLVTRFKQLPYYFDRKEKNTNEKVELSQSGLSMLFRKVLKSFTKEELPLYHSLQTSPSFL
EMLVNLRAELVTANLTYEDLPESPKNAELSAILGRFEDELNLSYANFSEFQDFIQSINEG
KFNQVLHNAVIIIDGYTRFTAEEESFISALHSAGSEIIIGTYARSSDYKLTDFSLSIYTN
ALEMIQRFRNKFSAQISSVSNTKPDKVYDKLTRLIELETNFLQKRENIELETKDKAHFEI
WESENQMAEIEAVAKDISQKIAQGALFKDFTVLVGDVGAYAIPVQEIFDLYEIPFFYAQE
EAMSQHPLIIFLESLYAIKKNNYRTNDVVNLLKSKVYSGVNFSQDTLDYFEYYVNKYKIR
GRKKFATAFEESEFLELEQVETLREEMLGEASALQKFLIGSSEKTGSKWLEQFQLFLQEG
KVLENMNLLYNQAEAEENHVLADKYEQVWKLLLSNLKEFQAVFAEQKMKGLEFLELILAG
LKGAKYRQIPANVDVVNIKDYELVEARTNKYIYAIGLTMANFPKIKKNSSLLSDEERATI
NQNVSHDDFRFIEQLNVTNSSKNTFTSVSLVNAATEKLVLSTPQIYANVQDDSSALLQLF
IEHTKAGESVKREVSSVNLMETVTHIGNTRSLIANIGKIEHLLAQEENDGIEDKRSFWSS
LFRILIKENTDFQRLIYNLDQDIAPVPLTPETVKEIYSDKIHASVSSFERFYNCEYQYFL
EQTLGLESFENIDLNSKVVGNFFHEVFEKLLDQANLTSENFDNHLESVLHEVDTSYARYF
TQDATAQFTWANLGEIVKQTAVVLKKGLENDQMKTLATESSFGLPKSELGNFAIDKINLR
GRIDRIDQFFDDSIGVIDYKSSQHKFDLASAYDGTSLQFLTYLDVLKQMNADQKLWGALY
LQLKNESINLSDVDYLGEIAALLAKKMRYEGLILEEYKDKVNQEIDVVNINRNNVYSEEE
FESLIKLNESHYARAGERLRDGEIAINPVMTKEGIDKSGNVHGCRYCPLKSICRFEASRH
MNDYAREVGQKSRKEILEELKGGPVND
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcatttatactgaaattacacaagatctaactcaatttcttttggagcgtgct
caacaggcattgaaagaagagaaaaaagtttattatattgttccatcttcaatgtctttt
gaaaaagaaaaggaaattttagagcgtatttcattaggtgcagatacagccgtttttgac
ctcttagtcacgcgtttcaaacagcttccgtattattttgatcgtaaagaaaaaaataca
aatgaaaaagtcgaactcagtcagtctggattgagtatgctttttcgtaaagttttgaag
tcttttactaaagaagaattgccgctttatcatagtttacaaacttcaccatcttttctt
gaaatgttggtaaacttgcgtgcagaattagttactgcgaatttgacatatgaagattta
ccagaaagtcccaaaaatgcggagttatcagcaattttgggacgtttcgaagatgaatta
aatctctcttatgctaatttttcagagtttcaagattttatacaaagtataaatgaggga
aaatttaatcaggtgttacataatgcggtaatcattattgatgggtatacgcggtttact
gctgaagaggaaagttttatttctgcccttcattccgcaggttcagaaatcatcattggg
acctatgctcgttcatcagactataagttgacagatttttctttgtcgatttacacgaat
gctctagagatgattcaacgttttcgcaataagttttctgctcaaatctcttctgtttcg
aatacaaaaccagataaagtatatgataagttgacacgtttgattgaactggaaacgaat
tttcttcaaaaaagagaaaatattgaattggagactaaggataaagctcattttgaaatc
tgggaatcagaaaaccagatggcagaaatcgaagccgttgctaaagatatcagccaaaag
atagctcaaggtgctttatttaaagactttacggtattggttggtgatgtgggagcttac
gcaataccagttcaagaaatctttgatttgtatgagattccttttttctatgctcaggaa
gaagcaatgagtcagcatcccttgattattttcttagaaagtctttatgcaataaaaaag
aacaattatcgtactaatgatgtggtcaatctccttaaaagcaaggtttacagtggtgta
aactttagccaagataccttagattactttgaatactatgtgaacaagtataaaattcga
ggcagaaagaaatttgccactgcttttgaagaaagtgaatttttagaattagagcaagtt
gaaactttaagagaagagatgcttggtgaagcctcagctctccaaaagtttttgataggt
agttcagaaaaaacgggatccaaatggcttgaacaatttcaactttttctccaagaaggt
aaagttcttgagaatatgaatctcctttacaatcaagccgaagctgaagaaaatcacgtc
ttggcagataaatacgaacaggtttggaaattactgctttctaacttaaaggagtttcaa
gctgtttttgctgagcaaaagatgaaaggactcgaatttcttgagttgattttagcgggt
ctgaaaggtgcgaaatatcgtcaaattcctgcaaatgttgatgttgtcaatataaaagac
tatgaactggtggaagcaagaaccaataagtacatctatgctattggtctgacaatggct
aactttcccaaaatcaagaaaaattcaagcttgctttcggatgaagaacgtgcaactatt
aaccaaaatgtatcgcatgatgattttcgttttatagaacaattaaatgtgacgaactct
agtaaaaatacctttacaagtgtctctttagtcaatgcagcaacagaaaaacttgtactt
tctacacctcaaatttatgcgaatgtgcaagatgatagttcggcattattgcagttattt
attgaacatacaaaagcaggagaaagtgttaaacgtgaagtctcttcagttaatctcatg
gaaactgtaacgcatataggaaatacacgttccctcattgcaaatatcgggaaaattgaa
catctacttgctcaagaggagaatgatggaattgaagataaacggagtttttggtctagt
ttattccggattcttattaaagaaaatacggactttcaacgtctgatttacaatcttgat
caagatatagcacctgtccccttgactcccgagactgtaaaagaaatttacagtgataaa
attcatgcttctgtgagtagttttgaacgtttttacaactgtgaatatcaatattttttg
gaacaaactttgggattagaaagttttgaaaatattgatttgaattcaaaagttgtgggc
aatttcttccatgaagtttttgaaaagcttctagaccaagcgaacttgacgagcgaaaat
tttgacaaccacttggaaagtgttttacatgaggttgacacttcctatgctcgctatttc
acacaagatgcaactgctcaatttacgtgggccaatcttggagaaatcgtcaagcaaact
gcagttgttttgaaaaaaggcttggaaaatgatcagatgaagactttagcaaccgagagt
tcttttggtttgccaaaaagtgaactgggtaattttgctatagacaagattaatttacgt
ggaaggattgacagaatagatcaattttttgatgatagtattggtgttattgattataaa
tctagtcaacataaatttgatcttgcctcggcctatgatggaacaagtttacagtttctc
acttatttagatgtcctcaagcaaatgaatgctgatcaaaagctttggggcgctctttat
ttgcagttgaaaaacgaaagcatcaacctttctgatgtagattatttaggagaaatagct
gcattattagcgaaaaaaatgcgctatgaaggccttatcctcgaagagtataaggataaa
gtaaatcaagaaattgatgttgtcaatattaatcgaaataacgtctatagtgaagaggag
tttgaaagtcttatcaagctcaacgaaagtcattatgctcgtgcaggagaacgactgcgt
gatggagaaatagcgattaatcctgtgatgactaaagaaggtatcgataaatctggtaac
gtacatggttgtcgctattgtcctttaaaatcaatttgtcgttttgaagcaagccgccac
atgaatgattatgcccgtgaagttggtcaaaaaagtcgtaaagagattcttgaagagttg
aaaggaggtccagtaaatgactga
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