Lactococcus formosensis: LMK00_00020
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Entry
LMK00_00020 CDS
T08654
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lfo
Lactococcus formosensis
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfo03400
]
LMK00_00020 (addA)
Enzymes [BR:
lfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMK00_00020 (addA)
DNA repair and recombination proteins [BR:
lfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LMK00_00020 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
DEAD
PDDEXK_1
KdpD
AAA_30
ResIII
eWH_GTF3C1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
USJ20418
UniProt:
A0A9Q8Y1P6
LinkDB
All DBs
Position
6026..9589
Genome browser
AA seq
1187 aa
AA seq
DB search
MTEVKFTPEQEEAIHSQGHNILVSASAGSGKTFVMANRIVEKIKNGIDIESLFISTFTKK
AAAELRMRLEKDLKKASYTSQDSGEKQRIKLALQKLPHADIGTMDSFTQKLLRENFNRVD
IDPNFRILADQTESDLMKQEVFDELIEQYLSEYPEIKETAKIDKKTFEKLVKNFSRDRNI
KGFQSVVYTVYRFASATENPENWLNNEFLKGFEFYQRFSDLPESFSEDVFLQLKNFILDL
QKALTEKNLTGKTLEKAQIVVDNQEYLLGSLTRRDYLQFTEIFRSLDFSRWSLKKDEILA
ESFKSVIGTKTDPGLVRNFLEKIKHLSTIEKYQPEAKVLAENLQKFVLYFYNVYLERKRS
ENAFEYSDIAHFAIKILEENSDVATAYRNKYSEIMIDEYQDTSHVQEAMLRLLSKNGDGT
DNLFMVGDIKQSIYGFRLADPSLFLKKYTAYADEENPNQLIRLKENFRSRGEVLSFTNEV
FKHLMDEEVGEMIYGEEEKLVQGNLVDYPQQLDENFYPQLLIYEEEALEDESEQMSDGEI
KIVAQKIKELIASDENLEYKDIALLVRSKTQNNKIEDILKAYDIPVVLDEGRVDFLKSLE
VTLILDVLRAIDNPLYDIPLVATLRSPMFNFTEDELTRISLNAGSDTRFWQKLQLSDGEL
INKALKAKINSFLERFTSWRKLVNEVSIHELLWKIYTETYYMDYVGALPNGELRQANLHA
LSIRAESYESAGYKGLFRFIKMIDKFMEQNNDLASVNIKLPQNAVRVMTFHKSKGLEFDV
VFLMNLQTKFNQKDLRDSVILTRENGLGMKYTADLKNEAAVETEFPYALVKMETLPYLVN
KDLKRNAMLSEEMRVLYVAFTRAKKKLYMVGKIKPKDLEKYGEAKLEKGILPLKYRQAAN
GFQHWLLALQKAHKLPMNFKVIKAADLQGIDKKFTVYPDFKKLSEDAKKFDKIMDSLSDV
KQARAILDYQYPKLAATKLSSIQTPSQVKKRSYEKQLELGNVLPSSEYERVKQLEMLDFG
QHKITAAEIGSATHSFMQYADFSRPNLFDFQQTLDQMDLLDEVKNKIDLPKILTLFDTDF
GKLLVENVDRTTKEAPFSMLKTDEVAHEQYIVRGICDGFIKFEDKIILFDYKTDYFSNTA
QIVEIKKNYEVQMELYADALRKAYHVNQVDKYLILLGGPRKVIVERI
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagtaaaattcacacctgaacaggaagaagcaatacatagccagggacataat
atacttgtttcagcaagtgccggatcaggaaagacctttgtcatggcaaaccgaattgtt
gaaaaaataaaaaatggtattgatattgaaagcttattcatttcaacttttactaaaaaa
gcagcggcagaactacgtatgcgtttagaaaaagatttaaaaaaagcaagttatacatca
caagatagtggagaaaaacagcggattaaacttgcgttacaaaaactgcctcatgcagat
attggcacaatggatagctttacacagaaacttttgcgagaaaattttaatcgcgtagat
attgatcctaattttagaattctagcagatcagacagaaagtgatctcatgaaacaagaa
gtttttgatgaacttattgagcagtacctttcagagtatccagaaatcaaagaaacagca
aaaatagataaaaaaacctttgaaaaattggtaaaaaatttttcaagagatcgaaatatt
aaaggttttcagagtgtggtttacacggtttacagatttgcttcagcaacagaaaatcct
gaaaactggttaaataatgaatttcttaaagggtttgagttttatcaaagattctctgat
ttacctgaatcattttctgaagatgtatttttacaacttaaaaattttattttagattta
caaaaagcgctgacagaaaaaaatcttacagggaaaactttagaaaaagcacagattgta
gtggataatcaagaatatcttcttggcagtttaactcggagagactatcttcaatttaca
gagattttccgttctcttgacttctcacgttggtcattaaagaaagatgaaattttagca
gaaagttttaagtctgttataggaactaagacggatccaggacttgtacgaaatttttta
gaaaaaataaaacatttgtcaacgattgaaaaataccaacctgaagcaaaagtattagct
gaaaatcttcaaaaatttgttctatatttttataatgtttatctcgagcgtaaacgttcg
gaaaatgcatttgaatattcggatattgcgcattttgcgattaaaatactagaagaaaat
tcagatgtcgcaacggcttatcgcaataaatatagtgagataatgattgacgagtatcaa
gatactagccatgtccaagaggcaatgttacgcttgttgagtaaaaacggtgatggcacg
gataatcttttcatggttggtgatatcaagcaatcaatctatggctttcgtttggcagat
cctagtctttttcttaaaaaatatacggcatacgctgatgaagaaaacccaaatcaactc
attcgtctcaaagaaaattttcgttcgcgtggtgaggtcctctccttcacaaatgaggta
tttaaacatttgatggatgaagaagtgggagaaatgatttatggtgaagaggaaaaatta
gtccaaggaaatcttgtggattatccgcaacagcttgatgaaaacttttaccctcaactc
cttatttatgaagaagaagctttggaagatgagtcagaacaaatgagtgacggtgaaata
aaaatcgttgcccaaaagattaaagagttaatagcatctgatgaaaatttagaatataaa
gatattgctcttttggtgcgttcaaaaactcaaaataataaaattgaagatatcttgaaa
gcttacgatattcctgtagttttggatgaaggacgcgttgattttttaaaatctctcgaa
gtaaccttaattttagatgtcttgcgtgcgatagacaatccgctgtatgatatccctttg
gtagctaccttacgctcaccaatgtttaattttacagaggatgagcttacaaggattagt
ttgaacgctggctctgacactcgtttttggcagaaattgcagcttagcgatggtgagctg
atcaataaggcacttaaagcaaagattaattcctttctagagaggtttacatcttggcgt
aaacttgtaaatgaagtcagtattcatgaacttctgtggaagatttatacagaaacttac
tacatggactatgttggggctttaccaaatggtgaattgcgtcaagcaaatcttcatgct
ctatcaataagagctgaatcctatgaaagtgcgggttataaggggttattccgattcatc
aaaatgatcgataaatttatggaacaaaacaacgaccttgcttctgtgaatattaagttg
ccgcaaaatgcggtaagagtaatgacttttcataagtccaaagggttagaatttgatgtt
gtctttctcatgaatttacaaactaagttcaaccagaaagatctaagagattcggtgata
cttacccgggaaaatggcttaggaatgaaatatacagctgatttaaaaaatgaagcagct
gtagagacagaattcccctatgccttagttaaaatggaaaccttaccgtatcttgtcaat
aaggatttgaagcgaaatgcaatgctttcagaagaaatgcgagttctttatgtcgctttt
acaagagcgaagaaaaaactctatatggtcggtaaaatcaaaccaaaagatttggaaaaa
tatggggaagcgaaattagaaaaaggcattttacctcttaaatatcgtcaagctgcgaat
ggctttcaacattggttgttagctcttcaaaaagcacataagttacccatgaattttaaa
gtaatcaaggcggctgacttacaaggaattgataaaaaatttacagtttatcctgacttt
aaaaaactatcagaagatgcgaaaaaatttgataaaataatggacagtttatccgatgta
aaacaagcgcgtgccatattagattatcaatatccaaagctagcagcaacgaagctttca
agcattcaaactcccagtcaagttaaaaaaagaagttatgaaaagcaattagagttggga
aatgttttaccatcaagtgagtatgaacgtgtaaaacagttggagatgttggattttggt
caacacaaaattactgctgccgaaataggttccgcgacacatagctttatgcagtatgca
gatttttcaaggccaaacttattcgacttccaacaaaccttggatcagatggaccttctg
gatgaagtgaaaaacaaaattgatttacctaagattctgaccttatttgacacagatttt
ggtaaattgctggttgagaatgtggatcgtacaaccaaggaagcacctttttctatgttg
aaaacagatgaagttgcacacgaacaatacattgttcgtggaatatgtgatggctttata
aaatttgaagataaaatcatcttgtttgattataagacggattatttcagcaatactgcg
cagattgttgaaatcaagaagaactatgaagttcagatggaactttatgcagatgcttta
agaaaagcctaccatgtcaaccaagttgacaagtatttgattttattaggagggcctcga
aaagttattgtagaaaggatataa
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integrated database retrieval system
