Lactococcus formosensis: LMK00_01545
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Entry
LMK00_01545 CDS
T08654
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lfo
Lactococcus formosensis
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfo03016
]
LMK00_01545 (truA)
Enzymes [BR:
lfo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LMK00_01545 (truA)
Transfer RNA biogenesis [BR:
lfo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMK00_01545 (truA)
Prokaryotic type
LMK00_01545 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
NAGLU
Motif
Other DBs
NCBI-ProteinID:
USJ20702
UniProt:
A0A9Q8Y278
LinkDB
All DBs
Position
313002..313748
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AA seq
248 aa
AA seq
DB search
MTRYMATIAYDGTNFAGFQTQNNQRTVQEEIEKVLTKLNSHQPVILHGSGRTDSGVHAHA
QRIHFDLQGQRDEERLRFALDTQTPSDIAFHEVTQVEEDFHVRFNKHEKIYEYFLENSKV
RSPFHRLYRAHFRYKLDEDLMRQALADLVGTHDFTGFTAAGATVEDKVRTITQAEIVKLD
NENYKFIFRGNGFLYKQVRNMMGTVIKIGNGRMPVSQIKKILESKNRDLAGPTATPEGLY
LKEVIYLD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgactagatatatggcaacgattgcttatgatggcacaaattttgcaggttttcaaact
caaaataatcaacggactgtccaagaagaaattgaaaaagtcttgacaaagctaaattct
catcagcctgtaatattgcatggttcagggcgtactgattcaggtgttcatgcacatgct
caacggattcacttcgacttacaagggcagcgagatgaagaacgtttacgttttgctttg
gacacgcaaaccccatcagatattgcctttcatgaagtcacacaagttgaagaggacttt
catgttcgctttaacaagcatgaaaaaatttatgaatattttctggaaaatagtaaagtt
cgaagcccctttcatcgcctttatcgtgcacattttcgttataaacttgatgaagatttg
atgcgacaagctctagcggatttggttggtacgcacgattttactggctttacagcagct
ggtgctacagttgaagataaggtccgaacgattactcaagctgaaatcgtgaaactcgac
aatgaaaattataaatttatttttcgtggtaacggttttctttataaacaagtgcgtaat
atgatgggaactgttatcaagatagggaatgggcggatgcctgtttcccagattaaaaag
attttagaaagtaaaaatcgtgacctagcaggtccgactgctaccccagaagggctctat
ctcaaggaggtaatttatcttgactaa
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