Lactococcus formosensis: LMK00_02675
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Entry
LMK00_02675 CDS
T08654
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lfo
Lactococcus formosensis
Pathway
lfo03030
DNA replication
lfo03430
Mismatch repair
lfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMK00_02675 (holA)
03430 Mismatch repair
LMK00_02675 (holA)
03440 Homologous recombination
LMK00_02675 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfo03032
]
LMK00_02675 (holA)
03400 DNA repair and recombination proteins [BR:
lfo03400
]
LMK00_02675 (holA)
Enzymes [BR:
lfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMK00_02675 (holA)
DNA replication proteins [BR:
lfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMK00_02675 (holA)
DNA repair and recombination proteins [BR:
lfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMK00_02675 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Glyco_hydro38C2
Motif
Other DBs
NCBI-ProteinID:
USJ20922
UniProt:
A0A9Q8Y3H9
LinkDB
All DBs
Position
550800..551801
Genome browser
AA seq
333 aa
AA seq
DB search
MSAFDELEKIKKAGLPQILVLYGEEEDIVQELKSRILEYVHFDNADLGQAYFDLNNANAN
LALEELESLPFFVEQKLVILENLTNLTTVKKAVFDEKQTVRFENFLNEPVETTQLILILH
GKLDSRLKLTKKLKSQATLLEAQELKPQELSRVFADTDLSGNILQRVFEKSNFSFPVIKQ
NLSLLKTYVGERETTLEDVEKVVPKSLQDNIFLLTDLILKNEVEQARDLVHDLTLQGEEL
IKILVILTNSFRLYYQVKLMQNKGWSEQKQTSHLKIHPYRVKLANQQVRNMQESFLGQAT
LSLIELDYKIKSSGVDANYLFDLALIKLALKDV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttttgatgaattagaaaaaataaaaaaagcaggtcttcctcaaatattggta
ctttatggtgaagaagaagacattgtacaggaactaaaaagtcgaattctagagtatgtt
cattttgacaatgcagacttaggacaggcctattttgacctgaataatgccaatgctaac
cttgccttagaagagctagagagtttgcctttctttgttgagcaaaagctggtcatttta
gaaaatctcacaaatcttacaacagtaaaaaaagctgtttttgatgaaaaacagacagtg
cgttttgaaaattttttgaatgagccagttgaaacgacgcagttgattcttattttgcac
ggaaagttagacagtcgacttaaactcactaaaaaactgaagagccaagcgactttgctg
gaagcacaggaattgaaacctcaagagttaagtcgagtttttgcagatacagatctttct
ggcaatattcttcaaagagtatttgaaaaatcaaatttttcttttccagtaatcaaacaa
aatctgtccttgttaaaaacatatgtgggagaaagagagactactcttgaggatgtggaa
aaagttgttcccaagtctctccaagataatatctttttactgaccgacttaattttaaag
aatgaggtggagcaagcacgtgatttggtccatgatttgacattacaaggtgaggaatta
atcaaaatattggttattttgacgaattccttccgactttattatcaggtgaaattgatg
caaaacaaaggctggagcgagcagaaacagacttctcatcttaaaatccacccttatcgt
gtcaaactagcaaaccagcaagtacgtaacatgcaggaaagctttctggggcaagctaca
ttgtccctcatcgagcttgattataaaataaaaagctcaggagtagatgcaaattatttg
tttgatttagccttgattaagttagctttgaaagacgtataa
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