Lactococcus formosensis: LMK00_03155
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Entry
LMK00_03155 CDS
T08654
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lfo
Lactococcus formosensis
Pathway
lfo00220
Arginine biosynthesis
lfo00240
Pyrimidine metabolism
lfo00250
Alanine, aspartate and glutamate metabolism
lfo01100
Metabolic pathways
lfo01110
Biosynthesis of secondary metabolites
lfo01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LMK00_03155 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LMK00_03155 (carB)
00220 Arginine biosynthesis
LMK00_03155 (carB)
Enzymes [BR:
lfo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LMK00_03155 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp
GARS_A
ATP-grasp_5
ATP-grasp_4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
USJ21012
UniProt:
A0A9Q8Y3P7
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All DBs
Position
642457..645642
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AA seq
1061 aa
AA seq
DB search
MPKRTDIKKIMIIGSGPIVIGQAAEFDYAGTQACLALKEEGYQVVLVNSNPATIMTDREI
ADKVYIEPITLEFVSKILRKERPDALLPTLGGQTGLNMAMELAESGILEELSVELLGTKL
SAIDRAEDRELFKELCESIGEPLCESEIATTVEEAVAQAKEIGYPIIVRPAFTMGGTGGG
ICDNEAELREVVANGLKLSPVTQCLIEKSIAGYKEIEYEVMRDSADNAIVVCNMENFDPV
GVHTGDSIVFAPSQTLSDAEYQMLRDASLKIIRALKIEGGCNVQLALDPHSYKYYVIEVN
PRVSRSSALASKATGYPIAKMSAKIAVGMTLDEIINPVTNTTYAMFEPALDYVVSKIARF
PFDKFEHGDRNLGTQMKATGEVMAIGRNIEESLLKAVRSLEIGVSHNRLEEAEKVTEEFL
YEKIIKAQDDRLFYISEAIRRGIPIEEIAALSKIDIFFLDKLLHIVEMEKELELNVFDPE
ILKTAKKNGFSDKEIARLWNVTESEVRRRRKDGEILPVYKMVDTCAAEFESSTPYFYSSY
AWENESVKSEKEKILVLGSGPIRIGQGVEFDYATVHSVKAIQALGYEAIIVNSNPETVST
DFSISDKLYFEPLTFEDVMNIIDLEEPKGVIVQFGGQTAINLAEPLEKAGVRILGTQVAD
LERAEDRDSFEKALSDLNIPQPPGATATNEEEAVANAAKIGYPVLLRPSFVLGGRAMEII
DNEADLRNYMNRAVKASPEHPVLVDSYLTGQECEVDAICDGKDVLLPGIMEHIERAGVHS
GDSMAVYPPQTFSPEIIETIVDYTKRLAEGLNCIGMMNIQFVIHEEQVYVIEVNPRASRT
VPFLSKVTGIPMAQLATQMILGKTLAELGYTSGLAPESELVHIKAPVFSFSKLAKVDSLL
GPEMKSTGEVMGSDTTLEKALYKSFEAAKLHMADHGSILFTVADEDKAETLEMARRFAEI
GYSLVATSGTAQYLKTAGLYVREVGKVTESTEETVIDDIRKGRVQAIVNTMGSKRVSTTE
TDGFLIRQEAISRGIPLFTALDTAEAILRVMESRSFTMNVI
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacggatattaaaaagattatgatcatcggttcaggaccgattgttatt
ggtcaggctgctgaatttgactatgcaggaactcaagcttgcttggcacttaaagaggag
ggttatcaagttgtccttgtgaactctaatccagcaacgattatgactgatcgtgaaatt
gcggataaggtttatattgagccgattacgcttgagtttgtcagtaaaattcttcgtaaa
gaaagaccagatgcgctcttgccgactttaggcggtcaaactggcctaaatatggcgatg
gaattagcagaaagtggtattttggaagaactttcggttgaacttttgggcacaaaacta
tcagcaattgaccgagcagaggaccgtgaattatttaaagagctttgcgaaagtatcggc
gaacctttgtgcgaatccgaaattgcaacgactgttgaagaagcagttgcgcaagcaaaa
gaaatcggctaccctatcattgtccgtccagcctttacgatgggaggaacaggaggcggt
atttgtgataacgaagctgaacttcgcgaggtcgttgccaatggcttaaaactttctcca
gtgacacaatgtttgattgaaaaatcaatagctggctataaagaaatagagtatgaagtg
atgcgtgactcagcggataatgccatcgtggtctgcaacatggaaaactttgaccccgta
ggtgtacatacaggagactcgattgtctttgcgccaagtcaaaccttgtcagatgctgaa
taccaaatgcttcgtgatgcttcattaaaaatcattcgtgctttgaaaatcgaagggggc
tgtaatgttcagcttgctttggatccacattcttataaatattatgtgattgaagtaaac
ccacgtgtctcacgctcttctgccttggcttctaaggcgacaggctatcctatcgctaag
atgtccgctaaaattgcagttggcatgacgctggatgaaatcatcaatcctgtcacaaac
acaacctatgctatgtttgagccagctcttgactacgttgtttctaaaattgcgcgcttt
ccttttgataaatttgaacatggtgaccgtaaccttggtacgcaaatgaaagcgacaggg
gaagttatggctatcggtcgtaacatcgaagaaagtctcctgaaagctgtacgctcttta
gaaataggtgtgagccacaatcgtctggaagaagcagagaaagttacagaagagttcttg
tacgaaaaaattatcaaagcacaggatgaccgtctcttctatatttctgaagcgattcgc
cggggaattcccattgaagaaattgcggctttaagtaagattgatattttcttcctagac
aaattactccatatcgttgagatggaaaaagagttagaattgaatgtttttgatccagaa
attttgaagacagccaagaaaaatggtttttcggataaagagattgcccgactttggaat
gtgacagagtcagaagtacgccgccgtcgcaaagatggagagattttgcctgtctacaaa
atggtagacacttgtgctgccgagtttgaaagtagcacaccgtatttctattcgtcttat
gcatgggaaaatgaatctgtaaaatctgaaaaagaaaagattcttgttttaggttcaggt
ccgatccgtattggtcaaggggtggagtttgactacgcgactgttcactctgttaaagcg
attcaggctttaggttatgaagcaattattgttaacagcaatcctgagacggtttctact
gatttctcaatttcagataaactttactttgaaccattaactttcgaagatgtcatgaac
attatcgacttggaagagcctaagggtgttatcgtgcagtttggtgggcagacagcgatc
aaccttgcagaacctttagaaaaagcaggtgtacgtatcttagggacacaagttgctgac
ttggagcgtgcagaagaccgtgattcttttgagaaggctttgtcagacctaaatattcca
caaccgccgggtgcgacagccacgaatgaagaagaagctgttgccaatgccgcgaagata
ggctatcctgtcttactccgtccatccttcgttttaggtggtcgtgccatggaaattatt
gataatgaagccgatttgcgtaattatatgaaccgtgcggttaaggcttcgccagagcat
ccagtattagtagacagctatttgactggacaagagtgtgaagttgacgctatttgtgat
ggaaaagatgttttgttgccaggaatcatggaacacatcgaacgcgcaggggttcactca
ggagactcgatggcggtttatccaccacaaacctttagtcctgagattattgagacaatc
gtagattacactaaacgcttggcagagggtttgaactgtatcgggatgatgaatattcag
tttgtcatccatgaagagcaagtatatgttattgaggtgaatccacgtgcttcgcgtacg
gttcctttcctatcaaaagttacaggaattccgatggcacagcttgccacacagatgatt
ttaggaaaaacactggcagagctcggttacacatcaggtctcgccccagagtcagaactt
gtccacatcaaagcacctgtctttagctttagcaaattagcaaaagtggacagccttctc
ggtccagagatgaaatcgacaggtgaagtgatgggatcagatacaaccttagaaaaggca
ctttataagtcttttgaagctgcaaaactacacatggctgatcatggatcaatcctcttt
acagtggctgatgaagataaagcagaaaccttagagatggcgagacgttttgctgagatt
ggttattcgctagtagcgacttctggaacggcacagtatctaaaaactgctggactctat
gttcgagaagttggtaaagtaacggagtcgactgaagagaccgttattgatgacattcgt
aagggacgtgttcaagctattgtcaataccatgggtagtaaacgtgtatcaacaactgag
acagacggcttcctcatacgtcaggaagcaattagtcgtggtattccactctttacagct
ttagacacagcagaagctatcctccgtgtgatggagagccgctcatttacaatgaatgta
atttaa
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