Lactococcus formosensis: LMK00_03395
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Entry
LMK00_03395 CDS
T08654
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lfo
Lactococcus formosensis
Pathway
lfo03030
DNA replication
lfo03430
Mismatch repair
lfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMK00_03395
03430 Mismatch repair
LMK00_03395
03440 Homologous recombination
LMK00_03395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfo03032
]
LMK00_03395
03400 DNA repair and recombination proteins [BR:
lfo03400
]
LMK00_03395
Enzymes [BR:
lfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMK00_03395
DNA replication proteins [BR:
lfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMK00_03395
DNA repair and recombination proteins [BR:
lfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMK00_03395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
USJ21058
UniProt:
A0A9Q8Y2W3
LinkDB
All DBs
Position
692146..692988
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AA seq
280 aa
AA seq
DB search
MRKERDKVEHYVVFDFETTGFSPQKNEIIQIGAVKYDQAHQEIARFNQLIKPTRSYLPTK
ISELTGIWPASLLDQPVLAEVLPDFIAFSRDSLMVAHNAPFDVSFLYQAIVDCEIGDAPH
FQVYDTLSEAKKLVQMPNYKLETFKDVLGIDLRSHDALNDCLITARLYQYLQDLSRPPKP
QSVSNESLQMDLFGEVDTRITEEVRRKLSLPITKDLVYYRRDTQRNWQKFEVTGLAITAA
YSTGYSLTATLYNNDTVTIHSDFLKEMQKANFTNEIEKEG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggaacgtgataaggtggagcattacgtagtatttgactttgagacaacggga
ttcagtcctcaaaaaaatgagattattcaaattggtgctgtcaaatatgaccaagctcac
caagaaattgcgcgctttaatcagttgattaagccgacgcgttcttatcttccgactaaa
atttcagaactgactggaatttggccagcttccttactggatcaacctgttcttgctgaa
gttttacctgattttattgctttttcaagggatagcttaatggtggctcataatgcacct
ttcgatgtcagcttcctctatcaagcgattgttgattgtgagattggtgatgccccacat
tttcaagtctatgacacgttatcggaagcaaaaaaattagtgcagatgcccaactataag
ttggaaacctttaaggatgttttaggtattgatttgcgcagtcatgatgcacttaacgat
tgccttatcaccgcacgtctctatcagtatttgcaagacttgtcacggccgccaaaaccg
caatctgtgtcaaatgaaagtttgcaaatggatttgtttggtgaggttgatacgagaatc
acggaagaagtccgccgaaaattgagcttaccgattaccaaagatttggtttattatcgc
agagatacacagcgaaattggcagaaattcgaggtgacaggtctagcaataacggcagca
tattcaacgggttacagcttaactgcaacactttataataatgatacagtaaccattcat
tctgattttttgaaggaaatgcagaaagctaactttacaaatgaaatagaaaaagaggga
taa
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