KEGG   Lactococcus formosensis: LMK00_03485
Entry
LMK00_03485       CDS       T08654                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lfo  Lactococcus formosensis
Brite
KEGG Orthology (KO) [BR:lfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lfo03016]
    LMK00_03485 (truB)
Enzymes [BR:lfo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LMK00_03485 (truB)
Transfer RNA biogenesis [BR:lfo03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LMK00_03485 (truB)
 Prokaryotic type
    LMK00_03485 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C
Other DBs
NCBI-ProteinID: USJ21076
UniProt: A0A9Q8Y364
LinkDB
Position
716062..716967
AA seq 301 aa
MNGILNVYKEAGWTSFDVVAKLRGILKTKKIGHGGTLDPQVTGVLPVAVGKATRLLEYME
EAGKVYEGEVTIGFSTETEDAEGKVIETTSVPLTLSEKEIDEAIRLFVGEIQQIPPMYSA
VKVKGKRLYEYARAGEMVERPTRNVTIKSFVRTSPVTFENECARFTFRVACSKGTYIRTL
AVDLSAALGYAGHMSKLQRTAANGLQIDKALTLEEIEAFVLDDKLTEILQPKEVAVSDLP
RIDVTDEQAAAVRVGKKFEEAEFGELCEAKRFAFFYQNKLIAVYMKHPEKPGILKPNKVI
N
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaatggaattttaaatgtatataaagaagcgggttggacatcttttgatgttgttgcc
aaacttcgaggaattttaaaaacgaaaaaaatcggccacggaggaacgcttgatccacaa
gtgacaggtgtgctgcctgtcgccgtaggtaaagccacgcgtcttctcgaatacatggag
gaggctggaaaagtatacgaaggtgaagtgacgatcggcttctctacagaaacagaagat
gctgaaggtaaagtcattgaaactacatctgttccgttaaccctttcggaaaaagaaatt
gacgaagcaatacgcctttttgttggtgagattcaacaaataccgccgatgtattcagcg
gttaaggtaaaggggaagcgcctttacgaatatgcacgtgcgggggaaatggttgagcgc
cccacccgcaatgttacaattaaatcgttcgtgcggacaagtccggtgacttttgaaaat
gaatgcgcacgatttacgtttcgtgtagcttgtagtaagggcacttacattcgtactttg
gcagtagacctctctgctgctttgggttatgctggacatatgtctaagttacaacggact
gcggctaacggattacagattgataaagcactgactttggaagaaattgaggcttttgtc
cttgatgataaacttactgagatattgcagcccaaggaagttgcagtgtctgatttacct
cgtattgatgtaacagacgaacaggcagcagccgtgcgtgtaggtaaaaagtttgaggag
gccgaatttggtgagctttgtgaagccaaacgctttgctttcttttatcaaaataaattg
atcgctgtctatatgaaacatcccgaaaaaccaggaatattaaaaccaaataaggtaata
aattaa

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