Lactococcus formosensis: LMK00_04585
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Entry
LMK00_04585 CDS
T08654
Symbol
lsa(D)
Name
(GenBank) ABC-F type ribosomal protection protein Lsa(D)
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lfo
Lactococcus formosensis
Pathway
lfo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LMK00_04585 (lsa(D))
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lfo02000
]
LMK00_04585 (lsa(D))
01504 Antimicrobial resistance genes [BR:
lfo01504
]
LMK00_04585 (lsa(D))
Transporters [BR:
lfo02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LMK00_04585 (lsa(D))
Antimicrobial resistance genes [BR:
lfo01504
]
Gene variants
Macrolide resistance genes
Transporters
LMK00_04585 (lsa(D))
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_15
AAA_29
ABC_tran_Xtn
AAA_22
AAA
RsgA_GTPase
nSTAND3
VapE-like_dom
AAA_16
Unpaired
AAA_23
Motif
Other DBs
NCBI-ProteinID:
USJ21283
UniProt:
A0A9Q8Y3B3
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All DBs
Position
942613..944106
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AA seq
497 aa
AA seq
DB search
MSNIKINNLTFGYTDQLIFDNVNINIDDQWKLGLVGRNGRGKTTLLKILLGEVDVHLEIK
TNKSFVYFPQTINDKDQLTLFVLQELADFEHWELERELTLMGVDLDTLWRPFNSLSGGEQ
TKTLLALLFLDEHNYPLIDEPTNHLDKASREKVAAYLSEKKGYILISHDRNFLNKTTDHT
LAIERADLQVYAGNFAIYEEEKRLRDLTEKAQDDKLRKEIGRLKQTAREKEAWSRNLEAT
KSRKKRGFDSETKRVDKGFIGRKAANMMQKSKNLEKRMKEDIADKELLLKNWEEVPGLEM
SVLESHQKRLLTVENLAAGFEDFLFEPVSFTLEQGQVLALTGENGRGKSSLMKVLTGEFT
GRYVGTFELAHNLVISEVRQLADNRGFLNEFAKKENLELELFLNNLRKLGVERKVFEQKI
ENMSQGQQRKVELARALSQPAHIYLWDEPLNYLDVFNQEQIIQMIKRSKPSMLVIEHDQY
FVDQVADAQIELVKSSV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatattaaaataaataatttaacatttggttataccgatcagcttatttttgac
aatgtaaatatcaatattgatgaccaatggaagctgggattggttggccgtaacgggaga
gggaaaacaacacttttaaaaatccttcttggagaagtggatgtacatcttgaaattaaa
accaataagagctttgtgtattttcctcagacgattaatgataaagaccagttgacctta
tttgtcttgcaagagttagctgactttgagcattgggaacttgagcgtgaattgacacta
atgggcgtagatttagatactttatggcgtcctttcaatagtctttctggtggagagcaa
acaaagacactcttagcacttttattcttggatgagcataattatccgctcatcgatgag
ccaaccaatcatcttgataaagcttcacgtgagaaagttgcagcctacttgtcagaaaaa
aagggatatattttaatctcacatgaccgtaattttctcaataagacgacagatcataca
ctggcgatagagcgtgcggacttacaagtatatgcaggtaattttgctatctacgaggag
gaaaaaagattgcgcgatctcacggaaaaggcacaagatgataaactcaggaaagaaatc
ggtagattgaagcaaacggcgcgtgaaaaagaagcgtggtcgcgtaacttagaagcaaca
aaatcccgcaagaaacgaggctttgattcggaaacaaaacgtgttgataaaggttttatt
ggacgaaaagcagcaaatatgatgcaaaagtctaaaaatctcgaaaagcgcatgaaagag
gatatcgctgacaaggaactacttctaaaaaattgggaagaagtacctggattggaaatg
agtgtcttagagagtcatcaaaaacgcttactgacagtggaaaatttagcggctggattt
gaagactttctttttgaacctgtgtcttttacacttgaacaaggtcaggtgcttgcacta
acaggagaaaatggcagaggaaaatcttctctaatgaaagtcctcacaggtgaatttact
ggccgttatgttggaacatttgagttggcccataacttggtcatttccgaagtaagacaa
cttgcagataatagagggtttctgaacgagtttgccaaaaaagaaaacttagaattagaa
ctttttctcaacaatttgcgcaaattaggcgtagagcgcaaagtttttgagcaaaaaatc
gaaaatatgagtcagggacagcagcgtaaagtcgaactggcccgcgccttgagtcagccg
gcgcatatttatctctgggatgaaccgctcaactatcttgatgtttttaatcaagaacaa
attattcaaatgataaagaggagcaagcctagtatgcttgtcattgagcacgatcagtat
tttgttgatcaagtagcagatgcccaaatcgaactcgtaaaaagcagcgtttag
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