Lactococcus formosensis: LMK00_04620
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Entry
LMK00_04620 CDS
T08654
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
lfo
Lactococcus formosensis
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfo03019
]
LMK00_04620 (rapZ)
Messenger RNA biogenesis [BR:
lfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LMK00_04620 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_18
nSTAND3
AAA_16
GlnE
Motif
Other DBs
NCBI-ProteinID:
USJ21290
UniProt:
A0A9Q8Y425
LinkDB
All DBs
Position
950535..951425
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AA seq
296 aa
AA seq
DB search
MDNKLNIVIITGMSGAGKTVAIQSFEDMGYFAVDNMPPNLIEKFVELLNTPDSKINKVAM
VVDMRSRIFFDRLRGIVAELSNLPEVNFKLLFLDASDVELVARYKETRRSHPLAIDGRVL
DGITQEREILSDLKSLAEVVIDTSELTPRNLRARILERFSETKEAPFRIEVISFGFKYGL
PMDADLVFDVRFLPNPHYIPELRDKTGQDKEVFNYVMNQKASEDFYKNLMNMLLPIIPAY
QKEGKSVLTIAFGCTGGQHRSVAFAERVSKALLKEDWHLNTSHRDKDRRKETVNRS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggataacaaactgaatattgtcattattacaggtatgtcaggcgcaggtaaaactgta
gctattcaatcttttgaagatatgggctactttgccgtggataatatgccacctaactta
attgaaaaatttgttgagcttctcaatacaccggatagtaagataaacaaagtcgcaatg
gttgtcgatatgcgctcacgtatcttctttgaccgcttgcgcggcatcgttgcagaactt
tctaatcttccagaagtgaatttcaaacttttattccttgatgcaagtgatgttgaattg
gttgcacgttataaagaaacacgccgttcacatccgctagctattgatggacgtgtactg
gatgggattacacaagaacgcgaaattctctcagatttgaagtccttggctgaagttgtt
attgatacaagcgagctcacaccacgtaatttgcgggcccgtattcttgagcgtttttca
gagacaaaagaagcaccatttcgtattgaagttatttcctttggctttaagtatggtttg
ccgatggatgcagacttagtctttgatgtgcgttttctaccaaacccacactatattcca
gagcttcgtgataaaacagggcaagataaagaagtcttcaactatgtcatgaaccagaaa
gcttctgaagatttttataaaaatttaatgaatatgctcttgccgattatacctgcatac
caaaaagaaggaaaatctgtattgacaattgcttttggctgtacaggtggacaacaccgt
tctgtcgcatttgctgaacgtgtatccaaagcacttcttaaagaagattggcatttaaat
actagccatagagataaggatagacggaaagaaacggttaatcgatcatga
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