Lactococcus formosensis: LMK00_04910
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Entry
LMK00_04910 CDS
T08654
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lfo
Lactococcus formosensis
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfo03400
]
LMK00_04910
DNA repair and recombination proteins [BR:
lfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMK00_04910
Archaeal homologous recombinant proteins
LMK00_04910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
SMC_N
nSTAND3
AAA_21
AAA_16
Motif
Other DBs
NCBI-ProteinID:
USJ21345
UniProt:
A0A9Q8Y3G1
LinkDB
All DBs
Position
1010987..1014124
Genome browser
AA seq
1045 aa
AA seq
DB search
MKPIYLEMNYFGPHAHSEIDFRALDEAPLFLISGDTGAGKSTIFDAMTYALFDKTTGDRE
AREMRSQFAQPDQRTEVIFYFEQGNFLYKVQRCPEQEVFKKRGTGTKTEKSQASLAIVDR
VFGIEQASLATKPVDVASEIYGLLNLSAEQFKKIILLPQNDFSRFLKSATNEKEEILKKI
FGTAIFTVFSEEVRNQYTKNNQENATLDSILQSQYSSSVWTEEEAKALEECPDKEKFDKA
TEFLEQKQMQESKARDLAKIAQQQVETIDKAYEDALLLEREFLEAEKTQKEYQEKIAEQA
AFYEQQKEAYEARSWAQQFKDILRDLEKVEKELEANQVREADYRSKAEQEQKILGEVKKR
EQDLDQKASEFEEKGKGIEELTRTITQAEQAEKLIRQKKDLEKKIVHLQLKQSETDVPLK
EAQVKLDQLQKEILDESILQEEKDALSRLKLDFHQQLSPLAEYLERLKQENQVAQKELNF
AEENITTLQQDFMLKQESYQEKRKLRQSLMIAQLQKELEDGLPCKVCGATEHPLSHIELD
VSDDDLKAAMQQVDEAQEAFAAAEERQEKAQSELEMAQKQATEKAETLQEMEQKFDQVYS
QFCQAHEGSFPKVFSRQELNIIFQAREDSYRQKSTAQKERSLEKEKLRVLVENLEAERQG
LFQESDKVKAQLETIAQSLAEFGQLQPSQALKEQKVILRQEVDNYYTECQEVREKIIALE
KRYAEQKAKHEERLTRIEEQKLKLQEGQRIIQNALAAPNAWANDLVTLKNWLTEDKLPEI
SKFINTYELEEKRLNRALAKYEQKLSGKQRPDLTELREEKQALSESFSQAQKTVIELSNT
RQQLETTVAKIEQTLETQGKAADKAREMTKLYNAIAGKTGDKLKLETFVVQHYLEKVLIY
ANQNFINQLSNNRYRFELAKESANKRRDHGLDISIYDNETGASRSSNTLSGGETFIAALS
IALALSEVVQNSAQGVQIEALFVDEGFGSLDQETLQKAMTALEQIGENRLVGLISHVEEM
KDSIAQQLRVEKVGDGRSQVKLFSK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatttacttagaaatgaattatttcggacctcacgctcactcggaaattgat
tttagagctttagatgaagcaccattatttttgattagtggcgatacgggtgccggaaaa
tctacgatttttgatgcaatgacttatgctctttttgacaagacgacaggagatcgtgaa
gcgagagagatgcgcagccagtttgcacagccagaccaacgtacagaagtcattttctat
tttgagcaggggaactttctttataaggtacaacgctgtcctgagcaagaagtctttaag
aaaagagggacaggtactaagacggaaaaaagtcaagccagcttagctattgtagatagg
gtatttggcatagagcaagccagcttggctacaaaaccggtcgatgttgccagtgaaata
tatggtcttttaaacctcagcgccgagcagttcaagaaaatcattttactgccacaaaat
gacttctcacgttttttaaaatcagccaccaatgaaaaagaagaaattctgaagaaaatt
tttggtacggcaatttttacggtcttttccgaggaagtgcggaatcaatacacaaaaaac
aatcaagaaaacgcaactcttgattcaatcttgcaaagccaatatagctcttctgtctgg
acggaggaagaagccaaagctttggaagaatgtccagataaggaaaaatttgacaaagcg
acagaatttctagagcaaaagcagatgcaagaaagcaaggctcgtgacttagcaaaaata
gcgcagcaacaagtagaaactatcgataaagcttacgaagatgccttgctgctggagcga
gagtttctagaagcagaaaagactcaaaaagaataccaggaaaaaatagcagagcaagca
gcgttttatgagcaacagaaagaagcctatgaagctcgcagctgggcgcaacaatttaag
gatattttacgtgacttggaaaaggttgaaaaagaactagaagctaaccaagtacgtgaa
gctgattatcgctcaaaagccgagcaagagcagaaaatacttggagaagtgaaaaaacgt
gagcaagatttagatcagaaagcttcagaatttgaagaaaaaggtaagggcattgaagag
ctgactcgcacgattacgcaagccgagcaggcagaaaaacttatccggcagaaaaaagat
ttggagaaaaagattgtccacttgcagcttaagcaaagtgagacagatgtgcccctaaaa
gaagcacaagtcaaacttgatcaattacaaaaagagatccttgatgagagtatcttgcag
gaggaaaaagatgctttaagtcgtctaaagttggactttcaccagcaactttctccttta
gcagaatatttggagcgcttaaaacaagaaaatcaagttgcacaaaaggaattaaacttt
gctgaggaaaacattacgacactgcagcaagattttatgctcaaacaggaaagttatcag
gaaaagcgaaaattacgccaaagtctcatgattgctcaactgcaaaaggaactcgaagat
ggtttaccatgtaaagtttgtggtgctacagaacatcctttatcacatattgagcttgat
gtttctgacgatgacctaaaagcagctatgcaacaagttgacgaagctcaagaagccttt
gctgctgcagaagaaaggcaagaaaaggctcaaagcgaacttgaaatggctcaaaaacaa
gctacagaaaaagctgaaacattgcaagaaatggagcagaagtttgaccaagtctacagt
cagttttgtcaagcacatgaaggcagttttcctaaagtgtttagtcgtcaagagctcaat
atcatttttcaagctcgagaagacagttataggcaaaaaagcactgcacaaaaagaacgt
tctctggagaaagagaagctgcgtgttttagtagaaaacttagaagctgaacgtcaaggg
ttgtttcaggagagcgataaagtcaaggcacagctcgaaacaatcgctcaaagtttagct
gagtttgggcaactgcaacccagtcaagctctaaaagagcagaaggttatattgcgccaa
gaagtcgataactattatacagagtgccaagaggtgcgtgagaagataatagcccttgaa
aagcgttatgcagaacagaaagcaaaacatgaagaacgtctgacacgtattgaagagcaa
aaactgaagcttcaagaaggacagcgcattatccagaacgcattggcagccccaaatgct
tgggccaatgatttagtcacgctgaaaaattggcttacagaggataaactgcctgaaatt
tccaagtttattaatacttatgaacttgaggagaaacgcttgaatcgtgctttagcaaag
tatgagcaaaaattaagcggtaagcaaagacctgatcttactgagttgagagaagaaaag
caagccttaagcgagagttttagccaagcgcaaaagacagttattgagctatccaataca
cgccaacaactcgaaacaacggttgctaagattgaacaaacacttgaaacacaagggaag
gcggcggataaggcgcgtgaaatgactaagctctacaatgcgatagcaggaaaaacagga
gataagctcaagcttgagacctttgttgtccaacattatctggaaaaagttttgatttat
gctaaccagaatttcatcaatcaactttccaataaccgctatcgctttgagttggccaaa
gaatccgccaataaaaggcgcgatcatggcttggacatcagcatctatgataatgagaca
ggtgcctcacgttcatccaatactttgtcgggtggagaaacctttattgcagctctgtca
atagcattggcactgagtgaagtggtgcaaaattctgcgcaaggggttcaaatagaagca
ctttttgtcgatgaaggatttggctcacttgatcaagaaacactccaaaaagccatgaca
gcgctcgaacaaataggagaaaaccgtcttgttggccttatcagtcacgtagaagaaatg
aaagactcaatcgcacagcaactgcgtgtcgaaaaagtcggagacggacgaagtcaggta
aaactcttttcgaaataa
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