Lactococcus formosensis: LMK00_07605
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Entry
LMK00_07605 CDS
T08654
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lfo
Lactococcus formosensis
Pathway
lfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMK00_07605 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfo03019
]
LMK00_07605 (recQ)
03400 DNA repair and recombination proteins [BR:
lfo03400
]
LMK00_07605 (recQ)
Enzymes [BR:
lfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMK00_07605 (recQ)
Messenger RNA biogenesis [BR:
lfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMK00_07605 (recQ)
DNA repair and recombination proteins [BR:
lfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LMK00_07605 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
USJ19695
UniProt:
A0A9Q8Y0C5
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All DBs
Position
complement(1530010..1531788)
Genome browser
AA seq
592 aa
AA seq
DB search
MNLEAKLKEIFGYESFRQGQKQIIEQVLQGKDTLGILPTGAGKSICYQLPALLQEGVTLV
VSPLISLMKDQVDQLNIANIPATFINSTVDEQEAYFRMQQIENGEVKILFVAPERFELES
FNYFLQHLPIDLVAIDEAHCISQWGHDFRPSYVTFAKRLADLPTTPTLLALTATATPRVS
ADIQDLLHIATDNTVKTGFLRENLRFEVVKGKDKRDFLKSYLKEHTDESGIIYANTRKEV
EEVTEWLNRNNFPAKRYHAGLSEGERQKNQEDFLYDEVPIMVATNAFGMGINKSNVRFVI
HYGMPATIEAYYQEAGRAGRDGLDSDAILLFSPNDVRLRNFLIEQGEGSEQHKEQEYEKL
RQMQAYTSSETCLQGYILQYFGDAGEDCRKCSNCLDDRERTDVTLDAQKVMSCVIRMEQR
FGKTAVAQVLVGSKNKNLARWNFEKLSTFGIMKGYSQKAVGELIDFLAGEGYLTVSAGKF
PLLGVSERGIAVLQGREKVWRRAPLSADKQNISHSVAFNLELFEELRALRLDIAKSEGVP
PFMIFSDASLKDMTRVMPLDEERFLEVSGVGQVKLKKYGQVFLKALNAYNKE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaagcaaaactcaaggaaatatttggctatgaaagtttccgtcaaggtcaa
aaacaaatcatagagcaagttctacagggaaaagatactctggggatattgccgactggt
gcaggaaaatccatttgctatcaattacctgcacttttacaagaaggggtcactcttgtg
gtctcacctttaatttccctgatgaaggatcaggtggatcagctaaatattgcaaatata
ccagctacttttattaattcgacagtagatgagcaagaagcttatttccgaatgcaacag
atcgaaaatggcgaggtgaaaatcttatttgtcgcacctgagcgttttgaactagaatct
tttaactattttttgcaacaccttcctattgatttagttgcaattgatgaagcacactgt
atctcccaatggggacatgattttagaccttcctatgttacttttgccaagcgtttggct
gatttgcctactacgccaacgctcttagcactaacagctacagctacaccccgagtatct
gcagatattcaagatttattgcacatagctacagataatactgttaaaacaggtttttta
cgcgaaaacttaaggtttgaagtagttaaaggaaaagataaacgtgactttttaaagtcc
tacttaaaagaacatactgacgaatcaggcattatctatgctaacacacgtaaagaagta
gaagaagttacggaatggttaaaccgaaataattttcctgctaaacgttatcatgccggt
ttatctgagggagagcgccaaaaaaaccaagaagattttctttatgatgaagttcctatt
atggtggcaaccaatgcttttggaatgggaataaataagagcaatgttcgctttgtgatt
cattatgggatgcccgccactattgaagcctactatcaagaagcaggtcgtgcaggacga
gatggacttgattcggatgctatcttattattttcgcccaatgatgttcgtctcagaaac
ttcttgatcgagcaaggcgaagggagtgagcaacataaggagcaagaatacgaaaaacta
aggcagatgcaagcttatacaagctccgaaacttgtctgcaaggctatattttgcagtac
tttggagatgctggggaagactgccgtaaatgctcaaactgtttagatgaccgggaacgt
acagatgttacgcttgatgctcaaaaagttatgtcctgtgttattcggatggaacaacgt
ttcgggaaaacagcagtcgcacaagttttagtaggctctaaaaataaaaatttggcacgt
tggaattttgaaaaactctcaacttttggcataatgaagggatattcgcaaaaagcagtt
ggagaactgattgactttttagcgggtgaaggttatctaactgtttctgcgggtaagttt
cccttgcttggagtttctgagcgtgggatagctgttctacaaggaagagaaaaggtttgg
cgacgtgcacctttaagtgctgataaacaaaacatttcacatagtgtggcgtttaatttg
gagttatttgaagaattacgggcattacgacttgatatcgccaagtcagaaggcgttcct
cctttcatgatattttccgatgcttcattgaaagatatgacaagagttatgcctttagac
gaagagagatttttagaagtttctggtgtaggtcaagtcaagttgaaaaagtatggacag
gtgttcctaaaggctctaaatgcctataataaagaatga
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