Lactococcus formosensis: LMK00_10765
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Entry
LMK00_10765 CDS
T08654
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lfo
Lactococcus formosensis
Pathway
lfo03030
DNA replication
lfo03410
Base excision repair
lfo03420
Nucleotide excision repair
lfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMK00_10765 (polA)
03410 Base excision repair
LMK00_10765 (polA)
03420 Nucleotide excision repair
LMK00_10765 (polA)
03440 Homologous recombination
LMK00_10765 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfo03032
]
LMK00_10765 (polA)
03400 DNA repair and recombination proteins [BR:
lfo03400
]
LMK00_10765 (polA)
Enzymes [BR:
lfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMK00_10765 (polA)
DNA replication proteins [BR:
lfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LMK00_10765 (polA)
DNA repair and recombination proteins [BR:
lfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LMK00_10765 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMK00_10765 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
USJ20267
UniProt:
A0A9Q8Y1E3
LinkDB
All DBs
Position
complement(2179397..2182012)
Genome browser
AA seq
871 aa
AA seq
DB search
MENKKNTLLLIDGSSLAFRAFFALYNQVDRFVAPSGLHTNAIYGFHLMLNNLVERLNPNH
VLIAFDAGKTTFRTEMFSAYKDGRARTPDEFREQLPFIKELIEKLGYNHYELKNYEADDI
IGTLDKMAELPEAGDYDVTIVTGDKDLIQLADSNTTVEISKKGVAEFESFTPTYLMEKTG
LTPEQFIDLKGLMGDSSDNYPGVTKVGEKTALKLLQEWGSIDNLYENIDSLKKSKMKENL
IADREMAFLSRTLATIDTKSPIEIDLADTLIKPVDTAELIKFYDEMGFAQFKAKLETAEA
DEVSLSFKVVEDATDILVDKDDFFYIEILNENYHKEDVIGFAWGNEEKVFVSKNTELLKN
FPFPENTYDFKKNKVLLHRLGIELPTAKYDSMLAKYLISTTEDNKVETIGRLFANKYIST
DEEVYGKGAKRRIPEDEILFKHLAGKIHVLATTKAVMIQNLEENEQYHLLTEMELPLANV
LAKMEIAGIAAEVSTLEEIGAANQKLIADLTEKIYELAGEEFNINSPKQLGVILFEKLQL
PHGKKTKTGYSTAADILENLAQDYELVAKILEYRQISKIQSTYVQGLIPQIAEDGRIHTR
YVQDLTQTGRLSSIDPNLQNIPVRLEAGRLIRKAFVAAEDNILLSSDYSQIELRVLAHMS
KDEHLIDAFNHGADIHSSTAMRVFNIDKPENVTPNDRRNAKAVNFGISYGETEYGLAKRL
SISNKEAAEMIQAYFERYPGVANYIAETKREAKDKGYVSTMFNRRRKLPEINNRNFMVRQ
GAERQAINAPIQGSAGDILKIAMINLDAALSEGKFKAKLLLQVHDEIILEVPKEELAAVQ
NLVKQTMESAVELNVPLLADENTGDSWYEAK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaagaaaaatacattactgcttatcgacggttcttcattagcatttcgggct
ttttttgccctttataatcaagtagatcgctttgtggctccaagtggcttgcacactaat
gctatatacggttttcatcttatgctgaacaatttggtggaaagattaaatcctaatcat
gttctgattgcatttgatgcaggaaaaacaacatttaggacggaaatgttttctgcatac
aaagacggtcgagcacgtacaccagatgaatttcgggaacagcttccttttataaaggaa
cttatagaaaagttgggctataatcactatgagctaaaaaactatgaagcggatgatatc
attggtactttagataaaatggctgaacttcctgaagctggcgattacgatgtaacaatc
gtaactggggataaggatttgattcaattggctgactcaaatactacagttgaaatttcg
aaaaaaggcgtagctgagtttgaaagctttactcctacttatttaatggaaaaaacaggc
ttaacgccagaacagtttattgatcttaagggtttaatgggtgatagctcggataattat
cctggggtaacaaaagttggggaaaaaacggccttgaagctacttcaagaatggggttct
atcgataatctttatgagaatattgattcactgaagaaaagtaagatgaaggaaaatctt
attgctgatcgtgaaatggcctttttatctcgtacacttgcaacgatcgatacgaaatca
ccgattgaaattgatcttgctgatactttgattaagcctgtggacacagcagaattgatc
aagttttatgatgagatgggatttgcgcaattcaaagcaaagcttgaaacagcagaggct
gatgaggtttcgctcagttttaaagttgtggaagatgcaactgatattttagtagacaaa
gatgatttcttttatattgaaattttaaatgagaattatcataaagaagatgtcattggt
tttgcttggggaaacgaagaaaaagtttttgtatctaagaatacagaactcctaaagaat
ttcccttttcctgaaaacacatacgattttaagaaaaataaagttttgcttcatcgctta
ggtattgaactacctacagccaagtacgacagtatgttagctaaatatcttatttctaca
acagaagataataaggttgaaactattggtcgattatttgctaacaagtatatctctact
gatgaagaagtttacggcaaaggagcaaaacgtcgtattcctgaagatgaaattcttttc
aaacatttggcaggtaaaattcatgtcttagctacaacgaaagcagtaatgattcaaaat
ctcgaggaaaatgaacaataccatctcctgacggaaatggaacttcccttggccaacgtg
ttagctaaaatggaaatagcaggaatagctgctgaagtgagcaccttagaagaaattggt
gcagcaaatcagaagctaattgctgatttaactgaaaaaatttatgaacttgcgggtgaa
gaatttaatattaactcgcctaagcaacttggagtcattctttttgaaaaattacagctg
ccacatggtaaaaaaacaaagacaggctattcaacagcagcagatattttagaaaactta
gctcaagactatgagctagtagccaaaatactggaatatcgtcaaatatcaaaaattcaa
tctacttatgtgcaagggttgattccgcaaatagctgaagatggccgtatccatacacga
tatgttcaagatttaacgcaaacaggtcgtctctcctcgattgatccaaatctgcagaat
attccagtacgcctagaagctggacgcttgattcgtaaagcttttgtcgcagctgaagat
aatattcttttgagttccgactattcacagattgaacttcgtgtcttggcgcatatgtct
aaagacgaacatcttatagatgcctttaatcatggtgctgacattcatagcagtacagca
atgcgtgttttcaacatagacaagcctgaaaatgttacgcctaatgatcgtcgcaatgcg
aaagctgtcaattttggtatctcctatggagaaacagaatacgggctcgctaagcgcttg
agtatttccaataaggaagcagcagagatgattcaagcttactttgaacgttatccagga
gttgcaaattatatagcagaaacaaagcgtgaagcgaaagataaaggctacgtaagcacg
atgtttaatcgccgtcgtaaactaccagaaatcaataatcgcaactttatggtgcgtcaa
ggtgcagaacgccaagctataaatgccccgatccaagggtcagccggggatatcttgaaa
attgccatgattaatctcgatgcagcattgtcagaaggcaagtttaaagccaaattattg
ctacaagttcacgatgagattattcttgaagtacctaaggaagaacttgcagcggttcaa
aacttggtaaaacaaaccatggaatctgcagtagagttaaatgttcccttacttgctgat
gaaaatacaggcgacagctggtatgaagcaaaataa
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