Lactococcus formosensis: LMK00_11385
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Entry
LMK00_11385 CDS
T08654
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lfo
Lactococcus formosensis
Brite
KEGG Orthology (KO) [BR:
lfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lfo03009
]
LMK00_11385
Enzymes [BR:
lfo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
LMK00_11385
Ribosome biogenesis [BR:
lfo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LMK00_11385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
USJ20383
UniProt:
A0A9Q8Y1L6
LinkDB
All DBs
Position
complement(2293085..2293795)
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AA seq
236 aa
AA seq
DB search
MRLDKYLAEAGLGSRKEVKVILKTGKVTVNDQKVKDGKLHVEPGKDGVNYDGRPLVYQEF
YYYLLNKPAGVVSATKDNKDKTVVELLKAQDFREDLFPVGRLDKDTEGLLLLTNDGPLSH
NLLSPKKHVEKEYFAQIQGKVTQETVHEFAAGLTLKSGEKVKPGQLFIEKSEENKSEIRL
IIHEGKFHQVKRMFEAVGMKVTYLKRLRMGSLTLDKALALGTYRPLTEEEILKLKE
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagattggataaatatttggcggaagccgggctcggatcacgtaaagaggttaaggtg
attcttaagacaggaaaagtgacagtgaatgatcagaaggtgaaagatggcaaactacat
gttgagccaggtaaagacggtgtaaactatgatgggcgccccctagtttaccaagagttt
tattattaccttcttaataaacctgctggtgttgtttcggcaacgaaagataataaggac
aaaacagttgtcgaattattaaaggctcaagattttcgagaagatcttttcccagtagga
cgcttggataaagatacagaaggccttcttttactgacaaatgatggaccactgagtcat
aatctcctgagccctaagaaacatgttgaaaaagagtactttgctcaaatccaaggcaaa
gttacacaagagactgttcacgagtttgcagcgggtttaaccttaaaatctggagaaaaa
gtcaaaccaggtcaactttttattgaaaaatctgaggagaataaaagtgaaatccgcctt
attattcatgaaggtaaatttcatcaggttaagcgaatgttcgaggctgtaggtatgaag
gtaacttatctcaaacgactgcgtatgggaagtttaacactggataaagcactagccttg
ggaacatatcgcccactcacagaagaggaaattttaaaactcaaggagtag
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