KEGG   Lactococcus formosensis: LMK00_11905
Entry
LMK00_11905       CDS       T08654                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lfo  Lactococcus formosensis
Brite
KEGG Orthology (KO) [BR:lfo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lfo02048]
    LMK00_11905
Enzymes [BR:lfo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LMK00_11905
Prokaryotic defense system [BR:lfo02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LMK00_11905
SSDB
Motif
Pfam: SWI2_SNF2 ResIII T1R_D3-like HSDR_N DEAD AAA_22
Other DBs
NCBI-ProteinID: USJ21614
UniProt: A0A9Q8Y5M2
LinkDB
Position
p2:2110..5187
AA seq 1025 aa
MSHSEQMIENQFIQILSEKENQWTYRPDLKSEEALWQNFRGHLNRINLAVLEEQLLTDKE
FKQVKVEFSRLTGTPFLASQWLRGENGVAQVLLEREDGKKVTLEAFRNKDISGGTSSYEV
VHQVVPDASRVDRGDVSLLINGLPIIHIELKKESAKDGFMQAYYQIQRYAEDGFFKGIYA
TTQIMVISNKVDTRYFARPSEDTAEAYARMKKFLFNWRTEDNQTVSDLFDFTRTVLRIPD
AHELISQYTILVDDQKNQKFLMALRPYQIHAIRKIRQKAAQHEGGFIWHATGSGKTITSF
VATKLLAQNAIGVDRTVMVVDRTDLDAQTQDEFTKFASEYHTRQTTGNSVANTLIVGIKN
QKQLARNLLSSKNNNTILVTTIQKLSAAMRSAQQESEEKGSNQFEKLRQEHLVFIVDEAH
RAVSDEEMKRIKKILPNSTWFGLTGTPIFEENKKQENGTFARTTSQQYGPLLHSYTTKNA
MDDGAVLGFQVEYHSLISEEDQEVIVTQLNQGKLPDDALQQEKLLPTELYEADEHIRAML
QKIFNRRSVVKKFKVQNGFPTMSAILTTHSIAQAKHIYQILKEMKDNGTLLNGRQFDERH
QLIDKDFPRVAITFSTNPDQLEKNEQDDELVEIMKAYAKQFDASPYQDEKLYNQNINKRL
ARKEKQYQSDGQWLDFVIVVDRLLTGFDSPTIQTLYIDREMNYQKLLQAFSRTNRIYTGK
DSGLIVSFRKPSTMKENVQNTFRLFSNENQNFDQLIPREYEEVKKEFIECSTLYKQSEAD
LSDHPNDLKTMIAQVSAYQKLEKSYKALRSYDQYEEDFGAFSEVVEQLPQYQGKTENIKT
KIKEMIEDKGHPEEDFEKLLQEIAFSSQLNATHKDVVDSFYINQLLKAIQLNEAGAVEKF
EKEIQQKDPQIQKMYHTLKDQLVNTTEEIDVAQLKETSIQNEIQRQLQKEAEEFGLSFDF
LQSAMNEYQGDKKTIPYLTHLLDSMTLSKEEFEAKTGEKYRRRTKVLEERLQQNFEQLQK
WKEEL
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgagtcattcggaacaaatgattgaaaaccagttcatacaaatcttaagtgagaaagaa
aatcagtggacttatcgtccggacttgaagtcggaagaagcactttggcaaaactttaga
ggccatttgaaccgaataaatttagcagtattggaagaacaactattaacggacaaagaa
tttaagcaagtcaaagtcgagttttcacgtttgaccggaacaccttttttagcttctcaa
tggcttagaggagaaaacggggtggctcaagttttattagagcgagaagatgggaaaaaa
gtgactttagaagcctttagaaataaggatatctcaggaggaacttcttcttatgaggtg
gttcaccaagtggtcccagatgcctctagagtagatcgtggagatgtgagtttgctgatt
aatgggctcccaatcattcatattgagctcaaaaaagagtccgctaaagacggttttatg
caagcttattatcaaattcagcgttatgcagaagatggattttttaaagggatctacgca
accactcaaatcatggtgatttccaataaagtcgatacccgatactttgcaagacctagt
gaagataccgctgaagcctatgctcggatgaagaagtttttatttaattggcggacggaa
gacaatcaaacggtttccgatttgtttgattttactcgtacagttttgcggatacccgat
gcccatgaattgattagccaatataccattctcgtcgatgatcaaaaaaatcaaaaattc
ctcatggctttaaggccttaccaaattcatgcgattcgtaagattcgtcaaaaagcggca
cagcatgaaggaggatttatttggcatgcgacaggttcaggaaagaccattaccagtttt
gtcgcaacgaaattattagcacaaaatgcgatcggtgtcgatcgtacggtcatggttgtt
gatagaacagacttagatgctcaaacgcaagatgagtttacgaagtttgcctcggaatat
cataccagacaaacgaccggaaattcggtagccaatactttgattgttgggatcaaaaat
caaaaacagttggctcgaaacctcctttcatcaaaaaataataatacgattttagtgacc
acgattcaaaaactctctgcggctatgcggagtgcccaacaagagagtgaagaaaaaggc
tcgaatcaatttgagaagctacggcaagaacatcttgtttttattgttgatgaggctcat
cgtgcggttagtgatgaggaaatgaagcgaattaagaaaatattacccaattcaacctgg
tttggattaacggggacgcctatttttgaagaaaataaaaagcaagaaaatggaaccttt
gccagaacgacgagccagcaatacgggccactccttcactcctatacaaccaaaaatgct
atggatgacggggctgtgttaggctttcaagtcgagtatcattcactgatttcagaagag
gatcaagaggtgattgtcacccaactcaatcaaggaaagttgccagatgatgccctccaa
caagaaaaattattgcctacggaactgtatgaagcagatgagcacatccgggctatgtta
caaaaaatctttaatcggaggagtgtggtcaaaaagttcaaggtacagaatggttttcct
acaatgtcagccattcttaccactcactcgattgctcaagccaaacatatttaccagatt
ttaaaagaaatgaaagataatgggacactcttgaatgggcgacaatttgatgaacgtcat
caactgatcgataaagatttcccaagagtagctattaccttctcaaccaatccggatcaa
ttagaaaaaaatgaacaagacgatgaattagtagagatcatgaaagcgtatgcgaaacag
tttgatgcctctccttatcaagatgagaagctctacaatcaaaatattaataaacggttg
gcccgtaaggaaaagcaatatcaatcggatggtcagtggctagattttgttattgttgtc
gatcgtttattgacaggctttgattctccaacgattcaaaccttatatattgatcgagaa
atgaactatcaaaagctccttcaagcgttctcaagaacgaatcgtatttatacaggaaaa
gattctgggttgattgtctcttttagaaaaccctccaccatgaaagaaaatgtgcaaaac
acgtttcgtctattctcaaatgaaaatcaaaactttgatcaactgattccaagagaatat
gaagaagtcaaaaaagaatttatcgaatgttcaacactttataaacaaagcgaagccgac
ctatcggatcatcccaatgatcttaaaacgatgattgcgcaagtgagtgcttatcaaaag
ctagaaaagagttataaagcgctccgaagctatgatcaatacgaagaggactttggagca
ttttcagaagtagtggagcagttgccacaatatcaaggaaaaacggaaaatattaaaaca
aagattaaagaaatgatcgaggataaggggcatcctgaggaagacttcgagaagctttta
caagagattgctttttcttcgcagctcaatgcgacacataaagacgtcgtggatagtttt
tatattaatcaacttttgaaagcgatccaattaaacgaagcaggggctgttgaaaaattt
gaaaaagaaatccaacaaaaggatcctcaaatccaaaagatgtatcacaccttgaaagat
caactcgtcaatacgactgaagagatcgatgtggctcaattaaaagagacttcgattcaa
aatgaaattcaaagacaacttcaaaaagaagccgaagaatttggattatccttcgacttt
ttacagtctgcaatgaatgagtatcaaggcgataagaaaacaatcccttatttaacccat
ttactggattcgatgaccctcagtaaagaagagtttgaagccaaaacgggtgaaaaatac
agaagaagaacaaaagttttagaagaacgactccaacaaaactttgaacaacttcaaaaa
tggaaagaagaattataa

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