Leptospirillum ferriphilum YSK: Y981_01105
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Entry
Y981_01105 CDS
T03197
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lfp
Leptospirillum ferriphilum YSK
Pathway
lfp00300
Lysine biosynthesis
lfp00470
D-Amino acid metabolism
lfp01100
Metabolic pathways
lfp01110
Biosynthesis of secondary metabolites
lfp01120
Microbial metabolism in diverse environments
lfp01230
Biosynthesis of amino acids
Module
lfp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lfp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Y981_01105
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Y981_01105
Enzymes [BR:
lfp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Y981_01105
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AIA29925
UniProt:
A0A059XS98
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Position
192183..193055
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AA seq
290 aa
AA seq
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MSLTRDFVKSHGLGNDYIVMTRFPGEMTPERIRLVCDRNFGVGSDGILLLTRASEPFGLR
IFNPDGSEAEKSGNGLRIFAKFLYEYGYATNRLFRIQTLGGMVTAEVYPDASNRVDRVKV
DMGKATVDPVSVGLANWEKPFVEELLELAPDLRLKGTAISVGNPHFVFFREELDEKFMRE
WGPKIENHPLFPKRINTQMVRVTGPSEIEIRIWERGAGWTLASGSSSCAAATVSVMLGKV
RSPVRVRMPGGILAIEVSPEQEIRMEGPVSEVMSGDFSPDLLALLDSAGK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgacaagggactttgtcaagtctcatgggcttgggaacgattatatcgtcatg
acccgctttccgggagaaatgactccggaacggattcgtctggtctgcgatcgcaatttt
ggtgtcggctcggatggaatccttttgttgacccgggcgtcagagccgttcgggctccgg
attttcaatcccgatggcagtgaggcggaaaaaagcggaaacggattgcgcatttttgcc
aaatttctttacgagtacggttatgcgaccaatcgtctgttccgtatccagactctggga
ggaatggtcacggcggaagtgtatccggatgcgtcgaacagggtcgaccgcgttaaggtc
gatatgggaaaggcgaccgtcgacccggtgtccgtcggactggcgaactgggaaaagcct
tttgtcgaggagctccttgaattggccccggatcttcgcctcaagggaacggcaatatcg
gtcggcaatcctcattttgtctttttccgtgaagagctcgacgagaagtttatgcgggaa
tggggtccgaagatcgaaaaccacccgctttttccaaaacggatcaacacgcagatggtt
cgggtgacggggccttcggaaatcgaaattcgcatctgggaacgcggcgcgggatggacg
ttggcgtccggctccagttcgtgtgccgcggcgaccgtttccgtcatgctgggaaaagtc
cggagtccggttcgcgtgcgcatgccgggggggatacttgccatcgaggtttctccggaa
caggagattcggatggaaggaccggtctccgaagtgatgtcgggagatttcagtccggat
cttctcgcgcttctcgattccgccggaaagtag
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