Leptospirillum ferriphilum YSK: Y981_01355
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Entry
Y981_01355 CDS
T03197
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
lfp
Leptospirillum ferriphilum YSK
Pathway
lfp02020
Two-component system
lfp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lfp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Y981_01355
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Y981_01355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfp03021
]
Y981_01355
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lfp02035
]
Y981_01355
Transcription machinery [BR:
lfp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Y981_01355
Bacterial motility proteins [BR:
lfp02035
]
Flagellar system
Flagellar assembly proteins
Stator
Y981_01355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
KORA
HTH_Tnp_ISL3
LacI
HTH_3
Sigma70_ECF
MarR_2
HTH_24
TarS_linker
DUF924
Motif
Other DBs
NCBI-ProteinID:
AIA29958
UniProt:
A0A059XT17
LinkDB
All DBs
Position
239078..239833
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AA seq
251 aa
AA seq
DB search
MPMDLDEDTLKEFAVTVKFFALRYSHRLPPELDVDDLISAGMGGLLDAARRFDPSRGIKF
KTLAEHRIRGAMLDEIRAADWMPRSVREKLTHVQQVKTELIARYKREPTRQEIAARMDMT
EEEFDRLSVDIEPHHLVSLEDLMDPEDGDSPSLLDRLSAPQEGDPLASLLQSEVSEKLCQ
ALDRLPEKQRLVLSLYYYEELTMKEVARVVGVSESRVSQIHGQALAALKQSLVETSETEN
VSSRQTVRHGG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggatcttgatgaagacacactgaaagaatttgctgtcacggtcaagttcttt
gcgctccgctattcccatcgcctgcctccggaactggatgtcgacgatctgatcagtgcc
ggtatgggagggcttctggatgctgcccggcggttcgacccttcccgcgggatcaagttc
aagacgttggcggagcaccggatccggggggcgatgctcgatgaaatccgcgcggcggac
tggatgcctcgctccgtccgggagaagctgacccatgtgcagcaggtgaagaccgagctg
attgcccgctacaaacgcgagccgacccgccaggagatcgcggcccgcatggacatgacg
gaagaagagttcgaccgcctgtcggtcgacatcgagccccatcatctggtgagtctcgaa
gacctgatggatccggaggacggcgacagcccctctctcctcgaccgtctgtcggcaccc
caggaaggggatccgttggccagccttctccagagcgaggtgtccgagaagctctgccag
gcgctcgaccggcttccggaaaaacagcgtcttgtcctgtccctgtattactacgaagag
ctgacaatgaaagaggtcgcgcgggttgtgggcgtcagcgaatcccgggtgtcccagatc
cacgggcaggctcttgccgcgctgaaacaatctcttgtcgaaacctctgaaacggaaaac
gtctcttcccggcagacggtccgtcatggtggctga
DBGET
integrated database retrieval system
