Leptospirillum ferriphilum YSK: Y981_03915
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Entry
Y981_03915 CDS
T03197
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lfp
Leptospirillum ferriphilum YSK
Pathway
lfp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Y981_03915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfp03400
]
Y981_03915
Enzymes [BR:
lfp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Y981_03915
DNA repair and recombination proteins [BR:
lfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Y981_03915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AIA30228
UniProt:
A0A059XTT7
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All DBs
Position
697237..698445
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AA seq
402 aa
AA seq
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MPEESPWKKSSVELRHRVGVSRYSGEIFQVSCRLPEVFGRQQCPVGRARSFPVFCGRFLR
YRECDSLFAIQPVFSSSKTFEASNVMADCGPMTRTTPRSLFLGTHVSIRGGLALSIERGE
TLGCGSIQIFSHSSRTWAVPALTEAEVNAFVSRHQKSSVGPVLMHASYLVNTATSDPEKR
KKSAAALEEDWILANRLGVYGLVLHPGSAAGQSDALAIRLSAEMIRDTVDREKGGSTLLL
LENTAGGGRTLGRDPGTMKQLVDRVDRPEKVGLCLDSCHLLASGAEIRNPRSYEEVLSAW
TEAAGPGGIRAWHLNDALFERGSGRDRHAHIGKGAIGLWFFWTLLRDHRFTGIPMVLETP
KTDDIREDRLNLGILERLSRQETFWPEDPEIVDCLAELETVA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagaaagtccctggaagaagagttctgttgaactgaggcaccgagttggggta
tcaagatattcgggagaaatcttccaggtgtcttgccgtctcccggaagttttcgggaga
cagcaatgtccagtgggtcgggccaggtcctttcctgtcttttgcggaaggttccttcgg
taccgggaatgcgattcccttttcgcgatccagcccgttttctcatcgtccaaaacattc
gaggcgtcaaacgtgatggctgattgcgggcccatgacccggacaacccctcgttctctt
tttctcggaacgcatgtctccatccggggagggctcgccttgtcgatcgagcgcggagaa
accctggggtgcggatcgattcagatcttttcccattcctcccggacctgggctgttccc
gcccttacagaagcagaggtcaacgcgtttgtctcccgtcatcaaaaatcgtcggtgggt
cccgttctgatgcatgcaagctaccttgtcaacacggcgacctccgacccggagaagagg
aaaaaatccgccgccgctcttgaggaggactggatccttgcgaatcgcctgggagtctat
ggccttgtccttcatcccggatctgcggcggggcaatcggacgctctggccatccgtctt
tcggcagaaatgatccgggacaccgttgatagggaaaaaggggggagcaccctgcttttg
cttgaaaacacggcgggtggaggacggacactgggacgggatcccgggacgatgaagcaa
cttgtcgaccgggtcgacagaccggaaaaggtcgggctttgtctggattcctgccatctc
cttgcttcaggagccgaaatccggaatccgcgctcctacgaggaggttctctcggcctgg
acagaggccgccggcccggggggaatccgggcgtggcatctgaacgatgcccttttcgaa
cggggatccggacgggaccggcatgcgcacatcggaaaaggggccattggtctgtggttt
ttctggacccttttgcgagaccaccgctttacaggaataccgatggttctggaaaccccg
aagacggacgatatccgggaagaccgtctgaacctcggcatcctcgagagactgtcccgt
caggagaccttttggccggaagaccccgaaatcgtcgactgtctggcggagctggagaca
gtcgcctga
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