Leptospirillum ferriphilum YSK: Y981_04840
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Entry
Y981_04840 CDS
T03197
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lfp
Leptospirillum ferriphilum YSK
Brite
KEGG Orthology (KO) [BR:
lfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfp03016
]
Y981_04840 (truB)
Enzymes [BR:
lfp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Y981_04840 (truB)
Transfer RNA biogenesis [BR:
lfp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Y981_04840 (truB)
Prokaryotic type
Y981_04840 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AIA30340
UniProt:
A0A059XTG5
LinkDB
All DBs
Position
885215..886192
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AA seq
325 aa
AA seq
DB search
MNPLSISPRTERTSGMFLVDKPAGMTSHDVVDSVRKNLGFIRVGHGGTLDPMATGVLPVF
VGKSTRLAEMIHGYDKTYRFDVRFGVTTDTGDSEGKPLTEIKFDQLDRSKLKNLLQSFTG
VRLQKPPMYSAVKKNGTPLYRLARKGIEIEREARRIEVYSLEMLTVFPDGKTASFRVKCS
KGTFVRTIAEEIGEAMGLGGHVVFLRREEFGHFRAEDAVSLEDLISMDMDEGLSSCLWSP
SRILESFPEIRILDAHLPDIHRGARIPAFQIYRTSGLFNLSEMVRISDRKGKCIAVGKTS
VSSVELDRLPKGLPVAQVDKLIDWL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccactgtcaatcagcccccggaccgaacgaacatcgggtatgtttcttgtggac
aaacccgccggcatgacatcgcatgatgtggtcgacagtgttcgtaaaaatcttggattt
atccgtgtcggacatggtggaacacttgatccaatggcgacgggtgtccttcccgttttt
gtcgggaaatccacgcgactggcagaaatgattcatggatatgacaaaacataccggttc
gacgttcgatttggtgtcacgacggatacgggggattcggagggaaagcctctgactgaa
atcaagtttgatcaactggacaggagcaagctcaagaatctgctccagtcttttacaggt
gtgagactccaaaagccgcccatgtattcggcagtcaagaaaaatggaactcctctttat
cgacttgcaagaaaagggattgaaatagagagagaagcccgtcgaattgaagtttactcc
ttggaaatgttgaccgtttttccggacggaaagactgcttcttttcgggtgaagtgttca
aagggaaccttcgtccggacgattgcagaagaaatcggagaggcgatggggttaggtgga
cacgtcgtattcttgcgccgggaagagttcggtcattttcgtgctgaggatgctgtttcc
cttgaagacttgatttccatggacatggacgagggtctctcctcttgtttgtggagtccc
tccagaatcctcgagagttttcctgaaatccggattttagatgcacatttaccggatatt
catcgaggagccaggatcccggcttttcagatttatcggacgagtggattgtttaatttg
tcagaaatggttagaatatctgatcgtaaaggcaaatgtatcgcagtggggaagacttcc
gtgtcaagcgtggagctcgacaggcttccaaaaggtttgcccgttgcccaggtcgataag
ttgatcgactggctctga
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