Leptospirillum ferriphilum YSK: Y981_06195
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Entry
Y981_06195 CDS
T03197
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
lfp
Leptospirillum ferriphilum YSK
Brite
KEGG Orthology (KO) [BR:
lfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfp03016
]
Y981_06195
Enzymes [BR:
lfp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Y981_06195
Transfer RNA biogenesis [BR:
lfp03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Y981_06195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AIA30506
UniProt:
A0A059XYY5
LinkDB
All DBs
Position
complement(1148093..1149499)
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AA seq
468 aa
AA seq
DB search
MSDSAATGEDRFPTGNPPHTRGSAFEGKTFYIKTFGCQMNVHDSERMAGLLTAEGGNPVS
EPAAADIILVNTCTIRDKADQKALSDLGRIRQVRKEGPGTILAVTGCMAQREGEEIFRLV
PDVDLILGPSQIRNLIPLLDAASTSRARVDGTLWPVPEMTTPPAIRPPGVTAFVTVQEGC
DKACAYCVVPATRGAERSRPVTDIVREVENLVSSGFREITLLGQNVNGYGQKGDTAGASF
PELLQRLSDIPGLLRLRFTTSHPMDMSEDLIDVMATSSRVMPHLHLPVQSGSDRMLERMQ
RGYSLDDYRRWIEKLRKKVPEAALTTDLIVGFCGETEEDFEKTLAAVEEFRFDGAFAFIY
SPRPSTPAHSWEDVPPREMSVERLERLQKKVEQQAMERNQSLVGSRVEILTEKWDPETRT
AVGRTPQFQTVRALVAPERPDPSPGDLLWVTITQGARAGLKGNAVSHA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattcggcagcaacaggggaagaccgcttccccaccggaaatcctccgcacacc
cgcggttccgccttcgaaggaaagacattttatatcaaaacgttcggctgccagatgaac
gttcatgactcggagcggatggccggactcctgaccgccgaaggagggaatccggtgtca
gaaccggccgcggccgacatcattctcgtgaatacctgtacaatccgggacaaggcggac
cagaaagccctgtccgacctcggacggatccggcaagtacgcaaggagggtcccggtacc
attctggccgtcaccggttgcatggcacagcgggaaggagaggaaattttccgtcttgtt
ccggacgtcgacctgattctcggtccgtcccaaatccggaacctgatccccttgctcgac
gctgcatccacctcccgcgcacgtgtggacggaacactctggccagtccccgaaatgacg
acccctccggccatccggcctccgggagtgaccgccttcgtcacggttcaggaaggatgc
gacaaagcatgcgcctattgtgttgttccagccacccggggtgccgaaagaagccgtcct
gtcaccgatattgtgcgggaagtggagaacctggtttcgtcgggattccgggaaatcact
cttctcggacagaatgtgaatggctatggacagaagggggatacggcaggagcctccttt
ccggaacttctgcagcgcctttccgacattccgggactgcttcgcctccggttcaccacg
tctcatccgatggacatgtcggaggatctgatcgatgtcatggcgacttcctcccgcgtc
atgccgcacctgcacctgcctgtccagtccggctcagaccgcatgcttgagagaatgcag
cggggatactcgctggatgactaccggcgatggatcgaaaaactccggaagaaagtgccg
gaagccgctctgacgacggatctgattgtcggtttctgtggggaaacggaagaggatttt
gaaaaaacgctggccgccgttgaggagttccgcttcgacggggctttcgctttcatttac
tctccacgtccttccacgccggctcattcctgggaggacgttcctccccgggagatgagc
gtcgaacgcctcgaaagacttcagaaaaaggtggaacaacaggcgatggagagaaaccag
tccctggtcgggagccgggtcgagatcctgacggaaaaatgggaccccgaaacccgcact
gccgtcggacggaccccccagttccagacggttcgcgcccttgtcgcaccggaacgtccc
gatccatcccccggagatcttctttgggtcaccatcacacagggcgcaagagcgggcctg
aagggaaatgccgtttctcatgcgtaa
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