Leptospirillum ferriphilum YSK: Y981_07255
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Entry
Y981_07255 CDS
T03197
Name
(GenBank) metal-dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lfp
Leptospirillum ferriphilum YSK
Brite
KEGG Orthology (KO) [BR:
lfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfp03019
]
Y981_07255
Messenger RNA biogenesis [BR:
lfp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Y981_07255
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Paralog
GFIT
Motif
Pfam:
HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AIA30623
UniProt:
A0A059XUV3
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Position
complement(1338061..1339284)
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AA seq
407 aa
AA seq
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MTGGDSPASGENAPSGSGSPFDPGPVAVLNINYIERWKSLSREAPRSGAGREGLAPVGQR
KTLLIPAGLPGREKRMVAGSGGKSVKGVAFVKTKSVQEAKNGPALFLDLVFRNDPPGPSL
REIPARLWEGVDRVSDQVESGTLIYAEGQEIVFNGENQIRLSRIQPLKATPEEIREYIPR
AAVSATNGMERLREYLASLEDPCLRAVGLGLLDDPEVRQAFPVAPAAKKNHHASLGGLLE
HTLEIMEMGHRIAPVLGLNRDLLLLGLFLHDIGKCWEISSRPGFSYTDEGRLVGHMYLGC
EKVAQVARQIEGFPETYLRVLQHFILSHHGEMAYGSPVLPSTPEAMAVHFLDNLSGQVNA
MRKVQPQDKDQWGFEKNRGAYIWKKGSDPSAWEHTPLGEGGRKVFDR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gtgactggaggagattctcccgcatccggggaaaacgcgccgtccgggtccgggtctcct
tttgacccgggtccggttgcggtgttaaatatcaattatatcgaacgatggaaaagtctt
tcaagggaagctccgcgaagcggtgccggacgggagggtctggcgccggtcggacagagg
aaaacgctattgattccggcgggattgccgggaagggaaaaaagaatggttgcgggttcg
gggggaaagtccgtcaaaggtgtcgctttcgtcaagacaaagtcggtccaggaggccaaa
aatggccccgctctctttctggatctggtcttccggaatgaccctccgggcccgtctctc
cgggaaatcccggcgcgactctgggagggggtcgaccgtgtgtcggaccaggtcgaatcc
ggaacgctgatttatgcggaagggcaggagatcgtttttaacggagaaaatcagatccgc
ctctcccgtatccagccgctgaaagcgacgccggaggagatccgggagtatattccgaga
gcggcggtttctgcgacgaacgggatggagcgtctgcgcgaatatcttgcgtcactggaa
gacccctgtctcagggcggttggccttggccttcttgacgacccggaagtccgtcaggcc
tttcctgtggcaccggcagcgaaaaaaaaccatcatgcctctctgggcggacttctggag
cacactctcgagatcatggaaatggggcaccgtattgcaccggtcctgggactgaaccgg
gaccttttgctcctcggcctttttctccacgatatcggaaagtgctgggaaatctcttcc
cgtcccggtttttcctacaccgatgaaggtcgtctggtcggccacatgtatctgggatgc
gaaaaagtcgcgcaggtcgcccgacagatcgagggttttccggagacttatctgagagtc
cttcagcacttcattctctcccatcatggggaaatggcctacggatcaccggttctcccc
tcgactccggaggcgatggcggtgcattttctggacaacctctccggtcaggtcaacgcg
atgcgcaaagtgcaaccccaggacaaggaccagtggggattcgaaaagaatcggggggcc
tacatctggaaaaagggatcggatccttccgcctgggagcacaccccgttgggagaggga
ggacggaaggttttcgaccggtga
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