Leptospirillum ferriphilum YSK: Y981_10335
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Entry
Y981_10335 CDS
T03197
Name
(GenBank) hypothetical protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lfp
Leptospirillum ferriphilum YSK
Pathway
lfp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Y981_10335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfp03400
]
Y981_10335
Enzymes [BR:
lfp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Y981_10335
DNA repair and recombination proteins [BR:
lfp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Y981_10335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AIA31919
UniProt:
A0A059XTH4
LinkDB
All DBs
Position
complement(1856675..1859962)
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AA seq
1095 aa
AA seq
DB search
MLVLHVSNRMERLTDQLFSVIRNDPPPPWSPVTILPQNPTIGRWLNYRLADWQGVAMNIA
TPLPGAWIRDFLETGFGCSGQGVHFERNALFLRLLRLLPSLRDDPAFSEFRHYLEEGDSS
RRLVSLADELSELFDRAMLYRPECLTSWEDSPEELSWPAILWRNMAGGNRPSHFARLLQN
FQSLPVLDSLWRESLPDRLFLFGLSGIAPATLDIFLRIGRETPCQVHFFFLNPTDRYWAD
MVSLRSWQNMEEDLKSYFDPGHPLLAFLGRTARDLHKKLEDAIRPEDPGADVRECFEEPG
GTTILSRLQRSMFRMDAAGEFPERLADDGSLRIVSSPSVVREVETLRDFLLDRFLALPDL
RLEDVVILAPETELYAGTIRAVFEASGESGSDGEPVLPVTVSDRPPFEATLAEALYGLLR
LPVFPLTLSFVERLLTFPEVLDRFSLDRKTASELLEALVRAGFRWGVDKKDRSRDEPEDH
TLDWAVSRILEGYCTGREERDSVLPVPPFVLSDDPQGEKAGLLFRLLERFRFWRDRLSGR
HPLSVWAESVSALLSDFFVLDPDRDRELFSLGKSLQELCRDIHDIEDMDCTMVTEMLSRR
IFRITWRDRFFSGGITFGRMVPLRSIPFRIVCLLGMGESAFPRNDVAQSFDFLREAPRPL
DRSVREDDLHLFLETLLSARSSLWISYVGGEGEDGTTGLPSSPVRQLLETLREPFPPEKK
GTGLFREVPSDPFDPFCFSREAGSWGSFSSSRAGIVQSRHSRKSSPFSFFVPKKGRLVLS
KGPEDSGMGRRIALSRLQSFYRNPPFYQAKNVLNLAVAGERPLLSDEEPFLLDPSREVED
PAQIPWPPVGVLQREQQARKRHERLERLLGGFEGLQEDQPETRRFSLSIGNVLLFGTLSL
HRETGLIVQDPFPWKLRPSDLLRAFLAHLAGSLAFSSYRGTILLDPAKDFPRAGLADRPV
FWSSEPEEAKRLLRPYLVLYRRFRTRTFPFVPAVSLAYALEQRNQKRGIPDPEKAIAAAQ
TSWRQLDPWSLDHGQKSSPKNAFRKDARRREGFYPHLFFDPDGEWIKDPFFGLLAQRLWD
PVLDRLSPDPEEGKE
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgtcctgcatgtctccaaccggatggagcggctgaccgatcagctcttttccgtg
atccggaatgatccccccccgccgtggtctccggtgacgatccttccccagaacccgacg
atcgggcgatggctgaactatcgtctggccgactggcagggggtggcgatgaatattgcg
acaccgcttcccggagcctggatccgggattttctggaaacaggctttggatgctccgga
cagggcgtccattttgagcggaatgcgctctttctgcgactcctccggcttcttccctcg
ctccgggacgatccggccttttccgaattccggcattatcttgaggaaggggactcttcc
cgtcgtctcgtcagtctcgccgatgaattgtccgagctgttcgacagggccatgctgtat
cgccccgaatgcctgacgtcgtgggaagactctccggaggagctctcctggcccgccatt
ctctggcgcaacatggcgggcggaaaccgtccatcgcattttgcccgtcttctccaaaac
tttcagtcccttcccgtcctggattccctctggcgggaatctcttcccgacaggctgttt
ctgttcggactctccgggatcgctcccgcaacgctcgacatcttcctccggattggccgg
gaaacgccctgccaggtgcatttcttctttctcaatccgacggaccgctattgggcggat
atggtgtctctccgttcctggcagaacatggaagaggatctgaagtcgtatttcgatccg
ggacatcctcttctcgcgttcctgggccggaccgccagggaccttcacaaaaagctcgaa
gacgcaatccggccggaggaccccggtgccgacgtccgggagtgtttcgaagagcccggg
ggcacgaccatcctctcccgccttcagcgcagcatgttccggatggatgccgccggcgaa
tttccggaaaggcttgcggacgatggttccctccggattgtctccagtccctccgttgtc
cgggaggtggaaacgctccgggattttctgcttgaccggtttctggcccttccggatctc
cggctggaagacgttgtgattctggctcccgagacagagctttatgccgggacgatccgc
gccgttttcgaagccagcggtgagagcgggtcagacggcgaacccgtcctgcccgtgact
gtctcggaccggcctccctttgaagccactcttgccgaagcgttgtatggtcttctccgt
cttcccgtctttcccctgacgttgtctttcgtcgagaggctcctgacgtttccggaagtt
ctggaccgcttttctctcgaccggaaaacggcctccgaacttctcgaagcgcttgtccgg
gcaggattccgctggggggtggacaaaaaggacaggagcagggacgagccggaagaccac
accctggactgggctgtcagccggattctcgaggggtattgtacggggagggaagaacgg
gattcggtccttccggtccctccttttgttctttcggatgatccccagggggaaaaagcc
ggcctgctgtttcgccttctggaacgttttcgtttttggcgcgacagactctccgggcga
caccccctctccgtatgggcggaatcggtgtcggcgcttctgtccgatttcttcgttctg
gaccccgacagggacagggagcttttttcgctgggaaaatcgctccaggagctttgccgg
gatatccacgatatcgaagacatggactgtacgatggtgacggaaatgctctcccgcaga
atcttccggatcacctggcgcgaccgttttttttccggcgggatcacgttcgggcggatg
gttcccctccgatccattccgtttcgcatcgtttgtcttctggggatgggagagagcgct
tttccacggaacgacgttgcccaaagcttcgatttcctccgggaagccccccgccccctg
gaccgttcggtccgggaggacgacctccatctttttctggaaactcttctgtccgcccgg
tcttccctgtggatcagctatgtggggggagaaggcgaggacgggacgacaggtcttccc
tcctcgcctgtccgacagcttctggaaaccctccgggaacccttcccgccggaaaaaaag
ggaacgggtctttttcgggaggttccctccgatccgtttgatcctttctgtttttcccgg
gaggcggggtcctggggaagcttttcctcttcccgtgccgggatcgtgcagtcccgtcac
agccggaaatcctctccgttttcgtttttcgttcccaaaaaaggacgactggtgttgtcc
aaagggccggaagacagcggaatgggacgtcgcatcgcgctctcccgcctgcaatcgttc
taccgcaatcctcccttttaccaggcgaaaaatgtcctgaatcttgctgttgcgggggag
cggccgcttctgtcggacgaggaaccctttcttctcgacccgtcccgggaggtggaagat
ccggcccaaattccctggcctccggtcggtgttctccaacgggagcagcaagccaggaaa
aggcacgaacgccttgaaaggcttcttggaggcttcgagggacttcaggaagaccaaccc
gaaacccgacgcttttctctttcgatcggcaacgttcttctttttggaaccctctccctt
cacagggaaaccggactcattgtgcaggatccttttccctggaagctccgcccttcggat
cttctccgggccttcctcgcccatctcgccggctctctcgccttttcctcctatcggggg
acgattcttctggatccggcgaaggatttcccccgggccggcttggcggaccgtcctgtt
ttctggtcctccgaaccggaggaggcaaagcgtcttctccgaccctacctggtcctgtac
aggcggttcagaacgaggacgttcccttttgtgccggccgtgtcccttgcctatgcgctg
gaacagaggaaccaaaagagggggatcccggatccagagaaggccattgccgctgcgcag
acatcctggagacagctcgacccgtggtccctggaccatgggcaaaaaagctccccaaaa
aacgctttccgaaaagatgcgagaaggcgggaaggattttatccgcacctttttttcgat
ccggacggtgaatggattaaagatccgttttttggactcctggcgcaaagactctgggat
ccggttctggaccgcctttctccggatccagaggagggaaaagaatga
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